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SCNpilot_expt_1000_bf_scaffold_5329_curated_30

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: 23497..24168

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00037CCD15 similarity UNIREF
DB: UNIREF100
  • Identity: 82.6
  • Coverage: 224.0
  • Bit_score: 379
  • Evalue 1.70e-102
Transcriptional regulator {ECO:0000313|EMBL:AHB49032.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.1
  • Coverage: 223.0
  • Bit_score: 379
  • Evalue 4.10e-102
DNA-binding response regulator in two-component regulatory system similarity KEGG
DB: KEGG
  • Identity: 83.0
  • Coverage: 223.0
  • Bit_score: 378
  • Evalue 2.10e-102

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Taxonomy

Hyphomicrobium nitrativorans → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 672
ATGCGTGTGCTGGTGGTCGAGGACGATCCTGATCTCAATCGTCAACTTTCCACTGCACTGGTCGACGCGGGATACGCCGTCGACTGCGCGCACGACGGCGAGGAGGGCTATTTCCTCGGCGAGACCGAGCCCTACGATATCGTGATCCTCGACATCGGCCTGCCGAAGAAGGACGGCATCAGCGTCCTCGAGCAGTGGCGGCGCGCGGAGCGCAACATGCCGGTCATCCTGCTCACGGCGCGCGACCGCTGGAGCGACAAGGTCCAGGGCATGGACGCCGGCGCCGACGACTATCTCGCCAAGCCCTTCCACATGGAGGAGCTGCTGGCCCGCATCCGCGCCCAGGTGCGCCGCCTGACGGGGCACGCCCGCAGCGAGATCGAGGTCGGGCCGCTCCGCCTCGACACCAAGACCGCACGGGTTTCCATGGGCGGCCAGCCGGTGAAGCTCACCTCGCACGAGTACCGTCTGCTCGCTTATCTCATGCATCACAACGAGCGGGTCGTCTCACGGACCGAGCTCGTCGAGCATCTCTACGATCAGGACTTCGACCGCGACTCGAACACCATCGAGGTGTTCATCGGCCGCCTGAGGCGCAAGATCCCGCCCGAGATGATCAAGACGGTGCGCGGGCTCGGCTATCGCCTGACGCGTGAGGGTGATGAAAGTTAA
PROTEIN sequence
Length: 224
MRVLVVEDDPDLNRQLSTALVDAGYAVDCAHDGEEGYFLGETEPYDIVILDIGLPKKDGISVLEQWRRAERNMPVILLTARDRWSDKVQGMDAGADDYLAKPFHMEELLARIRAQVRRLTGHARSEIEVGPLRLDTKTARVSMGGQPVKLTSHEYRLLAYLMHHNERVVSRTELVEHLYDQDFDRDSNTIEVFIGRLRRKIPPEMIKTVRGLGYRLTREGDES*