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SCNpilot_expt_1000_bf_scaffold_5395_curated_5

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: comp(2626..3672)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.8
  • Coverage: 313.0
  • Bit_score: 392
  • Evalue 7.30e-106
S-adenosyl-methyltransferase MraW; K03438 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] similarity KEGG
DB: KEGG
  • Identity: 59.6
  • Coverage: 334.0
  • Bit_score: 361
  • Evalue 4.10e-97
16S rRNA methyltransferase n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SI88_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 66.8
  • Coverage: 313.0
  • Bit_score: 392
  • Evalue 5.20e-106

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Taxonomy

Hyphomicrobium nitrativorans → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1047
ATGATGGCGGGCCGCCAGGCGCGCCCAGGGGAACGTGCCACTGAGGGTGCGGCCCGCCACATTCCCGTGTTGCTTCATGAAGTCCTCGCCGCCCTGACGCCCAGGGACGGCGAGGTCTTCGTCGATGGTACGTTCGGCGCCGGCGGCTATACGTCGGCCATTCTCGGAGCGGCCGATGTGCGCGTCATCGCCATCGACCAGGACCCGAACGCGCTGGCGGCCGGCCAGGCGCTCGTCGAGAAATACGCGCCGCGCCTGATCCTCAGCGAAGGCCGCTTCGGCGATCTCGATCACATTGCTGCGGAAGCCGGTTTTCCTGCTGTCGATGGCGTGGTCCTCGATATCGGCGTTTCCTCGATGCAACTCGACGAGGCCGATCGCGGCTTCTCCTTCATGGCCGACGGTCCGCTCGATATGCGCATGTCGCAGTCGGGACCGAGCGCGGCGGATGTGATTCGCGAGGCTTCCGAGGAGCTGCTCGCCGACATCTTCTTCCACCTCGGCGAGGAGCGGCGCTCGCGCGCCATCGCGCGCGCGATCGGCAAGGCGCGGGAAAGCAGCAACATCACCACCACGCGCCAGCTCGCCGATCTCGTCCAGCGCACGCTTGGCCGGCCCCGCGGTGACGACAAGCATCCAGCCACGCGCGTCTTCCAGGCGCTGCGCATCTACGTGAATGACGAGCTCGGCCAGCTCATGGACGCCCTCTCGGCTGCCGAGCGCTGCCTGAAGCCCGGCGGCCGGCTCGTCGTCGTGACCTTCCATTCGCTCGAGGACCGCATCGTGAAGCGCTACCTCACGGATGCGAGCGGCCGAAATCCTGCGGGCTCGCGCCATCTTCCGCCCACCGCAGAGGCCGTCTCGGCGCCGCGTTACCGAATTGTTAACCAACGCCCGTTAACCCCGTCTGAGAAGGAAATTGCCGCCAATCCACGAGCGCGCTCGGCGCGTCTCAGAGCAGCCGAGCGGACTTCGGCCCCGGCGGCGTCTCCTGCGGATGAGGCTCATTTCGGGGTCATCCGACCCGAAGGCCTTGCCCGCCGCTAG
PROTEIN sequence
Length: 349
MMAGRQARPGERATEGAARHIPVLLHEVLAALTPRDGEVFVDGTFGAGGYTSAILGAADVRVIAIDQDPNALAAGQALVEKYAPRLILSEGRFGDLDHIAAEAGFPAVDGVVLDIGVSSMQLDEADRGFSFMADGPLDMRMSQSGPSAADVIREASEELLADIFFHLGEERRSRAIARAIGKARESSNITTTRQLADLVQRTLGRPRGDDKHPATRVFQALRIYVNDELGQLMDALSAAERCLKPGGRLVVVTFHSLEDRIVKRYLTDASGRNPAGSRHLPPTAEAVSAPRYRIVNQRPLTPSEKEIAANPRARSARLRAAERTSAPAASPADEAHFGVIRPEGLARR*