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SCNpilot_expt_1000_bf_scaffold_5358_curated_11

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: 8744..9028

Top 3 Functional Annotations

Value Algorithm Source
Porin n=1 Tax=Sinorhizobium medicae (strain WSM419) RepID=A6U6J6_SINMW similarity UNIREF
DB: UNIREF100
  • Identity: 52.2
  • Coverage: 92.0
  • Bit_score: 101
  • Evalue 6.60e-19
porin similarity KEGG
DB: KEGG
  • Identity: 52.2
  • Coverage: 92.0
  • Bit_score: 101
  • Evalue 2.10e-19
Porin {ECO:0000313|EMBL:ABR59276.1}; Flags: Precursor;; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.2
  • Coverage: 92.0
  • Bit_score: 101
  • Evalue 9.20e-19

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Taxonomy

Sinorhizobium medicae → Sinorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 285
ATGGGCGGTGTGCTCATTTATGGCACCGGCGGCTTCGGCTTCGGCCACCTCGAAATGAGCACCACAGTGCTTGCGACAGGCGCAACTGTTGGTACTTCGCGGAATGAGACCGGATGGACAGTTGGCGGCGGTGCGGAATTCATTGTGGATCAGAACTGGTCCATCAAGGCCGAGTATCTCTACTATGATTTCGGCACCAACACTTACACTGTGGACGCCAACCAGACGGTCAGAGCCGACACCACTATTCACACGGGCAAAATCGGTTTCAACTATCGCTTCTGA
PROTEIN sequence
Length: 95
MGGVLIYGTGGFGFGHLEMSTTVLATGATVGTSRNETGWTVGGGAEFIVDQNWSIKAEYLYYDFGTNTYTVDANQTVRADTTIHTGKIGFNYRF*