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SCNpilot_expt_1000_bf_scaffold_5797_curated_6

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: comp(3519..4889)

Top 3 Functional Annotations

Value Algorithm Source
Pyruvate dehydrogenase {ECO:0000313|EMBL:KAI94828.1}; EC=1.2.4.1 {ECO:0000313|EMBL:KAI94828.1};; TaxID=858455 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Rhodomicrobium.;" source="Rhodomicrobium udaipurense JA643.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.0
  • Coverage: 465.0
  • Bit_score: 647
  • Evalue 1.70e-182
transketolase; K00162 pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] similarity KEGG
DB: KEGG
  • Identity: 70.6
  • Coverage: 466.0
  • Bit_score: 644
  • Evalue 3.10e-182
Transketolase central region n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3I601_RHOVT similarity UNIREF
DB: UNIREF100
  • Identity: 70.6
  • Coverage: 466.0
  • Bit_score: 644
  • Evalue 1.00e-181

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Taxonomy

Rhodomicrobium udaipurense → Rhodomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1371
ATGCCCACCCAGATTCTCATGCCGGCACTCTCTCCGACCATGGAGGAGGGCAAACTCGCCAAGTGGCTCGTGAAAAGCGGTACGCACATAAAACCCGGCGATATCATCGCCGAGATCGAGACCGACAAGGCGACCATGGAGGTCGAGGCCGTCGACGAAGGCACCGTCTCGGAGCTGCTGATCGCGGAAGGCACCGAGGGCGTGAAGGTCAATACGCCGATCGCCGTGGTCGTCGGCGATGGTGAGGGCAGCGGTACCGCCACCCCGAGCGCACCACCGCGGCCCGCACCGCAGCAGGCTGCTCCCGCCGCCGCCATCAATGCGACCCCTGCCGCCCCGCAGCCGCCGCCGGCACCGGCGATCATCGACACGAGCATCGCGCCCGGCACCGAGATGGTGACGCAGACCATGCGCGAAGCGCTCCGCGATGCCATGGCCGAGGAAATGCGCCGCGACCCGGACGTGTTCCTCATGGGCGAGGAAGTGGCGCAGTACCAGGGCGCCTACAAGGTCAGCCAGGGCCTGCTCGACGAGTTCGGCGCGCGCCGCGTGATCGACACGCCCATCACCGAGCAGGGCTTTGCCGGCATCGGGGTGGGCGCCGCCATGGCCGGCCTCAAACCCATCGTCGAGTTCATGACCTGGAACTTCGCCATGCAGGCGATCGACCAGATCATCAACTCCGCGGCCAAGACGCTTTACATGTCGGGCGGCCAGATGGGCTGCCCGATGGTGTTTAGAGGCCCGAACGGCGCCGCTGCCCGCGTCGCGGCCCAGCACTCGCAGTGCTACTCGTCGTGGTATGCGCACGTCCCCGGCCTCAAGGTGGTCGTGCCGTCCAATCCGGCCGACGCCAAGGGCCTCCTGAAGAGCGCCATCCGCGATCCCAACCCCGTGCTCGTGCTCGAGAACGAGATCCTCTACGGCATGCATGGACCGGTGCCGAAGGTCGAGGACTGGCTCGTGCCTATCGGCAAGGCGCGCATTGCCCGCGAGGGCAGCGACGTCACGATCGTCTCCTTCGCGCGCGGGATGCAGTACGCGCTCGCTGCTGCCGAGAAGCTCGCGGAAGAAGGCATCAGCGCCGAGGTGATCGACCTGCGCTCGCTGCGCCCGATCGACTGGGACACGATCCTGACGTCGATCAGGAAGACGAGCCGCATCGTCACGGTCGAAGAAGCATGGCCCGTCTGCTCGATCGGCTCGGAGATCTGCGCGCAGGCTGCGATCCAGGCCTTCGACTATCTCGATGCGCCGCCGGCCAAGGTATCGGGTGCGGACGTGCCCATGCCCTATGCCGCGAACCTCGAGAAGCTCGCGCTCCCGAGCGCCGATCAGGTCGTCGCGGCCGTGAAGTCGGTTATGGCGTAA
PROTEIN sequence
Length: 457
MPTQILMPALSPTMEEGKLAKWLVKSGTHIKPGDIIAEIETDKATMEVEAVDEGTVSELLIAEGTEGVKVNTPIAVVVGDGEGSGTATPSAPPRPAPQQAAPAAAINATPAAPQPPPAPAIIDTSIAPGTEMVTQTMREALRDAMAEEMRRDPDVFLMGEEVAQYQGAYKVSQGLLDEFGARRVIDTPITEQGFAGIGVGAAMAGLKPIVEFMTWNFAMQAIDQIINSAAKTLYMSGGQMGCPMVFRGPNGAAARVAAQHSQCYSSWYAHVPGLKVVVPSNPADAKGLLKSAIRDPNPVLVLENEILYGMHGPVPKVEDWLVPIGKARIAREGSDVTIVSFARGMQYALAAAEKLAEEGISAEVIDLRSLRPIDWDTILTSIRKTSRIVTVEEAWPVCSIGSEICAQAAIQAFDYLDAPPAKVSGADVPMPYAANLEKLALPSADQVVAAVKSVMA*