ggKbase home page

SCNpilot_expt_1000_bf_scaffold_5797_curated_8

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: comp(5326..6348)

Top 3 Functional Annotations

Value Algorithm Source
pdhA; pyruvate dehydrogenase E1 component subunit alpha (EC:1.2.4.1); K00161 pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] similarity KEGG
DB: KEGG
  • Identity: 79.8
  • Coverage: 321.0
  • Bit_score: 528
  • Evalue 1.40e-147
Pyruvate dehydrogenase E1 component subunit alpha {ECO:0000313|EMBL:AEI06461.1}; EC=1.2.4.1 {ECO:0000313|EMBL:AEI06461.1};; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.8
  • Coverage: 321.0
  • Bit_score: 528
  • Evalue 6.40e-147
Pyruvate dehydrogenase (Acetyl-transferring) E1 component, alpha subunit n=2 Tax=Oligotropha carboxidovorans RepID=B6JFX6_OLICO similarity UNIREF
DB: UNIREF100
  • Identity: 79.8
  • Coverage: 321.0
  • Bit_score: 528
  • Evalue 4.60e-147

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Oligotropha carboxidovorans → Oligotropha → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1023
ATGGCCGCCACAAGCCACACAGGAAACGGCCAGTTCCCGGACGCCGGCACGCCGGTTCAATTCACGCGCGACGAGGAGCTGACTGCCTATCGCGAGATGCTGTTGATCCGCCGCTTCGAGGAGAAGGCGGGCCAGCTCTACGGCATGGGCTTCATCGGCGGCTTCTGCCATCTCTACATCGGGCAGGAGGCGGTCGTCGTCGGCATGCAGATGGCGATCAAGCCCGGCGATCAGGTGATCACCACCTACCGCGATCACGGCCACATGCTGGCGACCGGCATGGACGCGAAGGGCGTCATGGCCGAGCTGACCGGCCGCAGTGGAGGCTACTCCCGCGGCAAGGGCGGCTCCATGCATATGTTCTCCAAGGAGAAGAATTTCTACGGCGGCCACGGCATCGTCGGCGCCAACGTGCCGCTCGGCGCGGGCCTCGCCTTTGCCAACAAATATCGCGGCAACGACAATGTCTGCCTCACGTACTTCGGCGATGGCGCCGCGAACCAGGGGCAGGTCTACGAAGCCTTCAACATGGCGAAGCTCTGGCATCTGCCGGTGATCTTCATCATCGAGAACAACCGCTATGCCATGGGCACGGCCATCGAGCGCGCCGCCGCGACGACCGATTTCTCGCGCCGCGGCGCCTCCTTCGACATTCCGGGCGAGCAGGTCGACGGCATGGACGTGCGCGCAGTGCGCGCGGCCGGCGAACGGGCCGTCAGGCGCGCCCGCGCCGGCGAAGGTCCTTGCATTCTCGAGATGCTGACGTACCGCTATCGCGGTCACTCGATGTCGGATCCCGCCAAGTACCGCACGCGTGAGGAAGTCGAGCGCGTGCGCGAGGAGCGCGATCCGATCGAGCGTGTGCGCCGGCGGATGCTCGAAGCCGGCATGATCAAGGAGGACGAGCTGAAGAAGATCGACGGCGAGATCCGTTCGATCGTCAACGCCGCCGCCGAGTTCGCCCAGAACGATCCCGAGCCCGATGCGTCCGAGCTTTGGACGGACGTGCTGCTGCCGGCGTGA
PROTEIN sequence
Length: 341
MAATSHTGNGQFPDAGTPVQFTRDEELTAYREMLLIRRFEEKAGQLYGMGFIGGFCHLYIGQEAVVVGMQMAIKPGDQVITTYRDHGHMLATGMDAKGVMAELTGRSGGYSRGKGGSMHMFSKEKNFYGGHGIVGANVPLGAGLAFANKYRGNDNVCLTYFGDGAANQGQVYEAFNMAKLWHLPVIFIIENNRYAMGTAIERAAATTDFSRRGASFDIPGEQVDGMDVRAVRAAGERAVRRARAGEGPCILEMLTYRYRGHSMSDPAKYRTREEVERVREERDPIERVRRRMLEAGMIKEDELKKIDGEIRSIVNAAAEFAQNDPEPDASELWTDVLLPA*