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SCNpilot_expt_1000_bf_scaffold_7921_curated_2

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: 329..646

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00036F0106 similarity UNIREF
DB: UNIREF100
  • Identity: 79.2
  • Coverage: 106.0
  • Bit_score: 163
  • Evalue 9.20e-38
Integration host factor subunit alpha {ECO:0000256|HAMAP-Rule:MF_00380, ECO:0000256|RuleBase:RU004485}; Short=IHF-alpha {ECO:0000256|HAMAP-Rule:MF_00380};; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.3
  • Coverage: 106.0
  • Bit_score: 161
  • Evalue 4.90e-37
ihfA; integration host factor subunit alpha; K04764 integration host factor subunit alpha similarity KEGG
DB: KEGG
  • Identity: 80.0
  • Coverage: 95.0
  • Bit_score: 153
  • Evalue 5.10e-35

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Taxonomy

No taxonomy information

Sequences

DNA sequence
Length: 318
ATGGGCAGCAAGACATTGACCCGTGCGGATCTGGCGGACGCGTTGGTGCGGAAAGTTGGTCTGCCACGGAACGAGTCCCAGGAGCTCGTCGAGCGCGTGCTCAGCGAAATTTCCGAGACGCTTTCGCAAGGCGAAGGCGTGAAGCTCTCCTCGTTCGGATCGTTCGGCGTGCGCGCCAAGGCGCAGCGCATGGGCCGCAACCCCAAGACAGGCGAGGAAGTGCCGATCACGCCGCGCCGGGTCCTGGTCTTCCGGCCGAGCAATATCATGAAGGAGCGTATCAATACGCGTCTGAACCGGCGCAAGGCGGCGGAATGA
PROTEIN sequence
Length: 106
MGSKTLTRADLADALVRKVGLPRNESQELVERVLSEISETLSQGEGVKLSSFGSFGVRAKAQRMGRNPKTGEEVPITPRRVLVFRPSNIMKERINTRLNRRKAAE*