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SCNpilot_expt_1000_bf_scaffold_2908_curated_9

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: 8254..9579

Top 3 Functional Annotations

Value Algorithm Source
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A8D0_STAND similarity UNIREF
DB: UNIREF100
  • Identity: 61.6
  • Coverage: 438.0
  • Bit_score: 533
  • Evalue 2.40e-148
two component sigma-54 specific Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 61.6
  • Coverage: 438.0
  • Bit_score: 533
  • Evalue 7.60e-149
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:ADH88603.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.6
  • Coverage: 438.0
  • Bit_score: 533
  • Evalue 3.40e-148

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Taxonomy

Starkeya novella → Starkeya → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1326
ATGTCGCTTGAGCGCCGGACCCTGGGCCTGATCGAGGACGATCCCATCATGGGTGAATCCTTGTCACGCAGTCTCGCTCTCGAAGGCGCCAAGGTCCACTGGTGGGCCAGCGGCAGCGAGGCGCTGAGCAAGATGCCCACGGCCGCCCTTGATGCCGTGATCTGCGACATTCGACTGCCGGATCGCTCGGGCGCTGAGGTCTTCCGCGAGCTCGCGCGGACGCGCAGCCCACCACCGTTCCTGTTCATCACCGGCTATGGCGATATCGACCAGGCCGTTGAGCTGATGCGCGAAGGCGCACGAGACTATCTGACAAAGCCCTTTGTCATGAGCGAGTTCTTGGCCCGCTTGGAGGAGGTCGTCGGTCGGCAGGGAGTGCCAAGCGACCCAGTCCTTGGCGTGTCGCCTGCCATGCAGAACCTTGAGCAGTTCCTGCAGCGGGCTGCCCGTGTCGGCTCGAACCTATTGCTGACTGGAGAGACCGGCGTCGGCAAGGAGGTGTGCGCGCGCTACCTGCATAGCCAGCGTCCAGAGCCGCGCGGCCCATTCGTCGCCGTGAATTGCGCGGCGATCCCGGCAGATCTCTTGGAGAGCGAGTTATTTGGCCACGAGAAAGGCGCCTTCACCGGCGCCCACGCCCGCCATCTGGGTTACGCGGAGCGTGCCGGCCGAGGTTTACTTTTCCTCGATGAGATCGCCGAGCTGGCGCCCAAGCTCCAGGCCAAGCTCTTGCGGGTTATCGAAAGCCGTTCCTTCCATCGCCTCGGCGGCGAACGCCCGGTGCCATTCCAGGCGCGGCTGATCTGCGCGACCAATGCAGATCTCGCGAAGCGCATTGCTGCCGGCGACTTCCGAAGTGATCTCTACTATCGGATCAATGTTCTCTCGCATCACATTCCGCCGTTGCGGGATCGCGCGGATGATCTCGAGTGGCTGATCGATCGATTCTTCGCCGAATTCTCGCGCACGATCGAGAGCGATGCCGTTGGTATGTCCGCGCTCGCCTACGACGCCGTGCGGGACCACGCCTGGCCCGGCAATGTCCGCGAGCTTCGGAACAGACTGGAGCGAGCCGTGGCCCTGGCCGCCGGTCGCTGGATCATGCCCGCAGACCTGTTTCCAGAACGCGCTACTGCGCAGATCATGCCGGATCACTTTATTGCCCCACTCGATTGTGCGCGTGACGATGCTGAGCGGCGTCACATCCAGCGCGCCTTGGCGATGACCGGGGGCGCCATTCTTCCCGCAGCGAAGGCGCTCGGCATCTCGCGGACGACACTGTGGGAAAAGATGAAGCGGCACGGTATCGGCGCTTCTGACTCGTAG
PROTEIN sequence
Length: 442
MSLERRTLGLIEDDPIMGESLSRSLALEGAKVHWWASGSEALSKMPTAALDAVICDIRLPDRSGAEVFRELARTRSPPPFLFITGYGDIDQAVELMREGARDYLTKPFVMSEFLARLEEVVGRQGVPSDPVLGVSPAMQNLEQFLQRAARVGSNLLLTGETGVGKEVCARYLHSQRPEPRGPFVAVNCAAIPADLLESELFGHEKGAFTGAHARHLGYAERAGRGLLFLDEIAELAPKLQAKLLRVIESRSFHRLGGERPVPFQARLICATNADLAKRIAAGDFRSDLYYRINVLSHHIPPLRDRADDLEWLIDRFFAEFSRTIESDAVGMSALAYDAVRDHAWPGNVRELRNRLERAVALAAGRWIMPADLFPERATAQIMPDHFIAPLDCARDDAERRHIQRALAMTGGAILPAAKALGISRTTLWEKMKRHGIGASDS*