name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_2908_curated_1
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3..1109)
|
FAD-dependent oxidoreductase n=1 Tax=Afipia birgiae RepID=UPI0003818EFA
Uncharacterized protein {ECO:0000313|EMBL:EJN12388.1}; Flags: Precursor;; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_2908_curated_2
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1150..1467)
|
ArsR family transcriptional regulator n=1 Tax=Afipia birgiae RepID=UPI0002F8C600
Putative transcriptional regulator {ECO:0000313|EMBL:EIG62879.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
ArsR family transcriptional regulator
|
|
SCNpilot_expt_1000_bf_scaffold_2908_curated_3
RBG_16_Gallionellales_56_9_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1596..1871)
|
Tax=RBG_16_Gallionellales_56_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_2908_curated_4
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2323..2640
|
Arsenite efflux pump n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RHI1_PHEZH
arsenite efflux pump protein; K03325 arsenite transporter, ACR3 family
Arsenite efflux pump {ECO:0000313|EMBL:ACG77441.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
|
|
SCNpilot_expt_1000_bf_scaffold_2908_curated_5
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2645..3883)
|
Major facilitator superfamily MFS_1 n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IZK9_RHOP2
major facilitator transporter
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABD06351.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
|
|
SCNpilot_expt_1000_bf_scaffold_2908_curated_6
unknown
|
Not on your lists |
comp(3885..3992)
|
glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Afipia birgiae RepID=UPI0002E25918
|
|
SCNpilot_expt_1000_bf_scaffold_2908_curated_7
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5941..6822
|
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003769BF1
phosphate/phosphonate ABC transporter; K02044 phosphonate transport system substrate-binding protein
Phosphate/phosphonate ABC transporter {ECO:0000313|EMBL:ADH88605.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
|
|
SCNpilot_expt_1000_bf_scaffold_2908_curated_8
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6819..8264
|
putative sensor histidine kinase (EC:2.7.13.3)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=272630 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1).;"
Putative sensor histidine kinase n=1 Tax=Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1) RepID=C5B453_METEA
|
|
SCNpilot_expt_1000_bf_scaffold_2908_curated_9
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8254..9579
|
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A8D0_STAND
two component sigma-54 specific Fis family transcriptional regulator
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:ADH88603.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
|
|
SCNpilot_expt_1000_bf_scaffold_2908_curated_10
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9745..10269
|
arsenite oxidase small subunit; K08355 arsenite oxidase small subunit [EC:1.20.9.1]
Twin-arginine translocation pathway signal n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I309_9RHIZ
Twin-arginine translocation pathway signal {ECO:0000313|EMBL:EHK52647.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
|
|
SCNpilot_expt_1000_bf_scaffold_2908_curated_11
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10284..11987
|
Arsenite oxidase large subunit n=1 Tax=Oceanibaculum indicum P24 RepID=K2K0P8_9PROT
Arsenite oxidase large subunit {ECO:0000313|EMBL:EKE76334.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
|
|
SCNpilot_expt_1000_bf_scaffold_2908_curated_12
unknown
|
Not on your lists |
comp(11896..12144)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_2908_curated_13
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12437..12805
|
Arsenite oxidase large subunit {ECO:0000313|EMBL:CCV04584.1}; EC=1.20.9.1 {ECO:0000313|EMBL:CCV04584.1};; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
arsenite oxidase large subunit; K08356 arsenite oxidase large subunit [EC:1.20.9.1]
Arsenite oxidase large subunit n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EIS8_9RHIZ
|
|
SCNpilot_expt_1000_bf_scaffold_2908_curated_14
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13523..13924)
|
Transcriptional regulator, MerR family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QH47_NITHX
MerR family transcriptional regulator
Transcriptional regulator, MerR family {ECO:0000313|EMBL:ABE64450.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
|
|
SCNpilot_expt_1000_bf_scaffold_2908_curated_15
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13992..16118
|
cadA3; cadmium-translocating P-type ATPase (EC:3.6.3.3); K01534 Cd2+/Zn2+-exporting ATPase [EC:3.6.3.3 3.6.3.5]
Heavy metal translocating P-type ATPase n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SMW0_NITWN
Heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase {ECO:0000313|EMBL:AEI05211.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
|
|
SCNpilot_expt_1000_bf_scaffold_2908_curated_16
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16194..16649
|
Disulfide bond formation protein n=6 Tax=Pseudomonas RepID=I4CZN4_PSEST
disulfide bond formation protein
Disulfide bond formation protein {ECO:0000313|EMBL:AFM35541.1}; TaxID=1196835 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri CCUG 29243.;"
|
|
SCNpilot_expt_1000_bf_scaffold_2908_curated_17
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16646..17311
|
DSBA oxidoreductase n=1 Tax=Nitratireductor indicus C115 RepID=K2NQW7_9RHIZ
DSBA oxidoreductase {ECO:0000313|EMBL:EKF40239.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
DSBA oxidoreductase
|
|
SCNpilot_expt_1000_bf_scaffold_2908_curated_18
Bradyrhizobium sp. S23321, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17907..18491)
|
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0G7J4_9BRAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL76731.1}; TaxID=335659 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. S23321.;"
|
|
SCNpilot_expt_1000_bf_scaffold_2908_curated_19
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18721..19167)
|
Uncharacterized protein n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SA49_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:AHB47292.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_2908_curated_20
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19121..21643)
|
Heavy metal efflux pump CzcA n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q132X0_RHOPS
CzcA family heavy metal efflux protein; K15726 cobalt-zinc-cadmium resistance protein CzcA
Heavy metal efflux pump, CzcA family {ECO:0000313|EMBL:ABS69208.1}; Flags: Precursor;; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
|
|
SCNpilot_expt_1000_bf_scaffold_2908_curated_21
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22310..23320)
|
Efflux transporter, RND family, MFP subunit n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3QDR6_RHOPT
RND family efflux transporter MFP subunit; K15727 cobalt-zinc-cadmium resistance protein CzcB
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ACF00817.1}; Flags: Precursor;; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain TIE-1).;"
|
|
SCNpilot_expt_1000_bf_scaffold_2908_curated_22
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23321..24616)
|
Outer membrane efflux protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QM85_NITHX
outer membrane efflux protein; K15725 cobalt-zinc-cadmium resistance protein CzcC
Outer membrane efflux protein {ECO:0000313|EMBL:ABE62662.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
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SCNpilot_expt_1000_bf_scaffold_2908_curated_23
unknown
|
Not on your lists |
comp(24679..25041)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_2908_curated_24
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25799..26338
|
FAD-dependent oxidoreductase n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI00036F8A5D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KGJ68633.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens SEMIA 5080.;"
|
|
SCNpilot_expt_1000_bf_scaffold_2908_curated_25
unknown
|
Not on your lists |
comp(26700..26897)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_2908_curated_26
unknown
|
Not on your lists |
comp(27072..27221)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_2908_curated_27
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27566..28723
|
Blr3093 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89QN1_BRADU
Arabinose ABC transporter permease {ECO:0000313|EMBL:ETR76803.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
rbh
|