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SCNpilot_expt_1000_bf_scaffold_2908_curated_21

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: comp(22310..23320)

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3QDR6_RHOPT similarity UNIREF
DB: UNIREF100
  • Identity: 45.4
  • Coverage: 328.0
  • Bit_score: 295
  • Evalue 4.90e-77
RND family efflux transporter MFP subunit; K15727 cobalt-zinc-cadmium resistance protein CzcB similarity KEGG
DB: KEGG
  • Identity: 45.4
  • Coverage: 328.0
  • Bit_score: 295
  • Evalue 1.50e-77
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ACF00817.1}; Flags: Precursor;; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain TIE-1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.4
  • Coverage: 328.0
  • Bit_score: 295
  • Evalue 6.90e-77

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1011
ATGAGTGAGATAACTATGAAGCCGCGCTCGACGACGCGCCTGGCGAGCAGCATTGCCATCATCGTCATTCTCGCGGCTGGCGGGCTCGCCGCATACTATCTCGTCACGACGAAGCCTGCGGCGAACACCTCGGCCCACGGCCACGGCGACAAGGGTGGCGATGGGCGCGATGACGGCCACGGACACAGCGAGAAGCTGGTCGTCAAGCTCACGCCGGCTCAACTCAAGAGCGCTGATCTGACCATCGAGACCGCCGGCGAAGGTGTCATCCGCGAAGTCCTGCCGCTCGACGGAATCATCCTACCGAACGAGGAGAGGGTCGCCGCCGTACTGCCGCGCTTCGGCGGCGTACTGCGGGCCGCCTCGAAGCGCATCGGCGACAAGGTCACGCAAGGCGAGGTCGTGGCGCGCATCGAGAGTAACGAAAGCCTTACGCAGTACGACGTCGTGGCGCCGATCAGTGGGACAGTGATCGAGCGCCGCGGCGTGCTTGGTGAGTATGCCGACAAGGACCGCCGACTGATGGTGATCGCTGATCTCTCGACACTGTGGGTCGACTTCCGCGTCTACCAGCAGGATTTTCCGAAGCTCCAGCTCGGCCAGAAGGTGAGCATTACACTCAGTAACAACGGTGGCCCGAAGGTCGCCGACATCAGCTACATCTCGCCGATCGGCCAGTCGGACACGCAGAGCCTGCTCGCACGAGCCGTCGTCGACAATGCGGACGGAAGGTTCCGCCCCGGTCTCTACGTCACGGGGAAGGCGCAGGTCGCGGAGCAGGCAGCTGCCGTAGCCGTCAAGCAGAGCGCCGTCCAATTCATCAAGAACAAGCCGGTCGTCTTCGTCCAAGGCAAGGAGGGCTTTGAGGGGCGAGAGGTCGAGCTCGGCTTCAAGGACGATGAGACGATCGAGATCCTCTTCGGCGTTGTCGCCGGCGAGAGGGTCGTGACCGGCAACAGCTTCGTCCTGCGTGCCGAGATCGGCAAAGGCGAAGCGACACACGAGCACTGA
PROTEIN sequence
Length: 337
MSEITMKPRSTTRLASSIAIIVILAAGGLAAYYLVTTKPAANTSAHGHGDKGGDGRDDGHGHSEKLVVKLTPAQLKSADLTIETAGEGVIREVLPLDGIILPNEERVAAVLPRFGGVLRAASKRIGDKVTQGEVVARIESNESLTQYDVVAPISGTVIERRGVLGEYADKDRRLMVIADLSTLWVDFRVYQQDFPKLQLGQKVSITLSNNGGPKVADISYISPIGQSDTQSLLARAVVDNADGRFRPGLYVTGKAQVAEQAAAVAVKQSAVQFIKNKPVVFVQGKEGFEGREVELGFKDDETIEILFGVVAGERVVTGNSFVLRAEIGKGEATHEH*