ggKbase home page

SCNpilot_expt_1000_bf_scaffold_2908_curated_14

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: comp(13523..13924)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, MerR family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QH47_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 82.7
  • Coverage: 133.0
  • Bit_score: 217
  • Evalue 1.20e-53
MerR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 82.7
  • Coverage: 133.0
  • Bit_score: 217
  • Evalue 3.60e-54
Transcriptional regulator, MerR family {ECO:0000313|EMBL:ABE64450.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.7
  • Coverage: 133.0
  • Bit_score: 217
  • Evalue 1.60e-53

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrobacter hamburgensis → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 402
ATGACTGAGAGGCATCTGGCTATCGGAGAGCTTGGAAAACTGACCGGCACCAAGGTCGAGACCATCCGCTACTATGAGCGGATCGGCCTGCTCGCTGCGCCGAAGCGCACGACGGGGAACTATCGGGCTTATGGCCCTGCGCATCTGAGCCGGCTGAGCTTCATCCGCCGCTCGCGCGATCTCGGCTTCTCGCTCGATCAGGTACGTGCCCTGCTCGATCTGTCTGATGACCGCGACCGACCGTGCGAAGCTGTCGACGTCATCGCCAAGGCCCATCTGGCCGAGATCGATCGCAAGATCGCCGATCTGCGGGCTCTGCGACGCGAGCTGAACAACATGATCACGCAGTGCCGCCGCGGCACGGTTGCGGACTGCCGGATCATCGATGCGCTGTCGCCCTGA
PROTEIN sequence
Length: 134
MTERHLAIGELGKLTGTKVETIRYYERIGLLAAPKRTTGNYRAYGPAHLSRLSFIRRSRDLGFSLDQVRALLDLSDDRDRPCEAVDVIAKAHLAEIDRKIADLRALRRELNNMITQCRRGTVADCRIIDALSP*