ggKbase home page

SCNpilot_expt_1000_bf_scaffold_5728_curated_4

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: comp(1187..1507)

Top 3 Functional Annotations

Value Algorithm Source
Putative uncharacterized protein n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3I6L6_RHOVT similarity UNIREF
DB: UNIREF100
  • Identity: 40.5
  • Coverage: 74.0
  • Bit_score: 64
  • Evalue 7.70e-08
Uncharacterized protein {ECO:0000313|EMBL:KAI95192.1}; TaxID=858455 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Rhodomicrobium.;" source="Rhodomicrobium udaipurense JA643.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.4
  • Coverage: 62.0
  • Bit_score: 73
  • Evalue 1.80e-10
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 40.5
  • Coverage: 74.0
  • Bit_score: 64
  • Evalue 2.40e-08

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodomicrobium udaipurense → Rhodomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 321
ATGTCCGCAACTCCCAAAAACCGACGATTGAGCGCAGATTCGCTCATTCCTCGTCAAGAAGCAGCAGCAGCTTCTTTACCCAAAGCCACGGTTCACGATGCCGATGGCCTTGAGCCCCTCTGGGATACCGCGACCGCAGCCGAGTTCCTGGGAATTTCCGTGCCTACCGTTCAACGCATGCGAAGCGATGGATCGGGGCCGAGGTTCGTGCGCTTGGGACGGGGCAAGCGGTCGCGCATCGCCTATCGCCGCTCCGATCTCGCCGCCTGGATCGAGGCCAACACCTATGCATCCACGGCTCAATATCCAAAGGGGAAGTAA
PROTEIN sequence
Length: 107
MSATPKNRRLSADSLIPRQEAAAASLPKATVHDADGLEPLWDTATAAEFLGISVPTVQRMRSDGSGPRFVRLGRGKRSRIAYRRSDLAAWIEANTYASTAQYPKGK*