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SCNpilot_expt_1000_bf_scaffold_5728_curated

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_5728_curated_1
unknown

Not on your lists

comp(1..240)
DNA (240bp) protein (80aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_5728_curated_2
unknown

Not on your lists

comp(318..602)
DNA (285bp) protein (95aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_5728_curated_3
unknown

Not on your lists

683..925
DNA (243bp) protein (81aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_5728_curated_4
Rhodomicrobium udaipurense, Rhodomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1187..1507)
DNA (321bp) protein (107aa)
Putative uncharacterized protein n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3I6L6_RHOVT
Uncharacterized protein {ECO:0000313|EMBL:KAI95192.1}; TaxID=858455 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Rhodomicrobium.;" source="Rhodomicrobium udaipurense JA643.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_5728_curated_5
unknown

Not on your lists

1678..2952
DNA (1275bp) protein (425aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_5728_curated_6
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3527..4573)
DNA (1047bp) protein (349aa)
Pirin n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SDM4_9RHIZ
Pirin {ECO:0000313|EMBL:AHB48971.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
plasmid encoded RepA protein
SCNpilot_expt_1000_bf_scaffold_5728_curated_7
unknown

Not on your lists

comp(4570..4821)
DNA (252bp) protein (84aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_5728_curated_8
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4818..5462)
DNA (645bp) protein (215aa)
Plasmid segregation oscillating ATPase ParF n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QGT3_NITHX
cobyrinic acid a,c-diamide synthase; K03496 chromosome partitioning protein
Plasmid segregation oscillating ATPase ParF {ECO:0000313|EMBL:ABE64564.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_expt_1000_bf_scaffold_5728_curated_9
unknown

Not on your lists

6007..6369
DNA (363bp) protein (121aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_5728_curated_10
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6241..6513)
DNA (273bp) protein (91aa)
Prevent-host-death family protein n=1 Tax=Rhodovulum sp. PH10 RepID=J9DSB9_9RHOB
Prevent-host-death family protein {ECO:0000313|EMBL:EJW09327.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
prevent-host-death family protein
SCNpilot_expt_1000_bf_scaffold_5728_curated_11
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6597..7253)
DNA (657bp) protein (219aa)
Integrase n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SEL3_9RHIZ
Integrase {ECO:0000313|EMBL:AHB48968.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
phage integrase family protein
SCNpilot_expt_1000_bf_scaffold_5728_curated_12
unknown

Not on your lists

7991..8302
DNA (312bp) protein (104aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
dusA; tRNA-dihydrouridine synthase a; K05539 tRNA-dihydrouridine synthase A [EC:1.-.-.-]
tRNA-dihydrouridine synthase n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FMD2_STIAD
Displaying 12 items

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