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SCNpilot_expt_1000_bf_scaffold_5728_curated_6

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: comp(3527..4573)

Top 3 Functional Annotations

Value Algorithm Source
Pirin n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SDM4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 59.1
  • Coverage: 337.0
  • Bit_score: 406
  • Evalue 2.70e-110
Pirin {ECO:0000313|EMBL:AHB48971.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.1
  • Coverage: 337.0
  • Bit_score: 406
  • Evalue 3.80e-110
plasmid encoded RepA protein similarity KEGG
DB: KEGG
  • Identity: 52.5
  • Coverage: 341.0
  • Bit_score: 373
  • Evalue 6.10e-101

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Taxonomy

Hyphomicrobium nitrativorans → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1047
GTGAGACTGGCGCCAGCCCTGCACGATGTTGAGGGCATCCGCGATACCGATCTTCTCGAGAAGCTGGCCGCCGCCAGGGGCAACGCGGGCTTTGCCTTCGTGGTCCGGCAATGCCGCTTCGAACAGGAGAAGCGTGACAAAGCACTGCTCCTCACGCGCAACGCCCGCCGCCGCCAGATCGCCCGCGACAAGCTGGAAGCCGGTGCCGCCGACCGCCAGCACCTCCGCCATATCCATAGCGTACTGGCAATCTGCGGCCTGCCGTACACGCGCCAACCTCTCGAAGTACGAGAATTCGAGCGCAACCAGGGGCGTATGAGCCTGGTCGTCGAAGCCGGCAAGCTGCGCACGCCCGACGGACGTTGGGAATTGCAGCCGCTTCCCTACGGTTCTCGCGCCCGACTGCTCTTGCTGCACTTGTGCAGCGAGGCCATTCGCCAGAAAAGCGCAGTGGTTGACATCGAGGACAGCCTCACCGCCTTCATTAAAGCCATGGGCTTTCCCGTGACAGGCGGCAAGAACGGAACGCTCACCTCCTTCAAAACCCAGGTCAACGCTCTTGCAGCCTGCCATATGCGTATCGGTGTGTGGGATGGGGTGCGCGCGCGGACGGTAAGCACGCAGCCATTCTCGTCGATTGACGTCTGGTTCCCAACATCTCCCGACCAGAGGATGATGTGGCCGTCGACGATCACCTTCAGCCACGACTTCTTCTCGACACTTGCGAACCACGCCCTGCCGGTCAATGTGGAAGCCGTGAAGGTGTTTGCCGGCAGTCCGCGCAAACTCGACCTACTGTTCTGGTTAGGCTATCGCCTCAACAACCTCACCGAACCCCTGCGCATCTCCTGGGACGCCCTCAAAGAGCAGTGGGGGCAAGGCTACAATCGAGACCGCAACTTCAAGCGCGATTTCGCTGAAGAGATTGCGCAGATCAAGGAGATCTTCCCTAAGCTGCCCATCGAGCTCAGAGAAGAAGGCTGTGTGATCAAGCCAGCGGGCACGAACGCGCTCGCGATCCCCGCCCGGCGCACCGTACGCCGCTGA
PROTEIN sequence
Length: 349
VRLAPALHDVEGIRDTDLLEKLAAARGNAGFAFVVRQCRFEQEKRDKALLLTRNARRRQIARDKLEAGAADRQHLRHIHSVLAICGLPYTRQPLEVREFERNQGRMSLVVEAGKLRTPDGRWELQPLPYGSRARLLLLHLCSEAIRQKSAVVDIEDSLTAFIKAMGFPVTGGKNGTLTSFKTQVNALAACHMRIGVWDGVRARTVSTQPFSSIDVWFPTSPDQRMMWPSTITFSHDFFSTLANHALPVNVEAVKVFAGSPRKLDLLFWLGYRLNNLTEPLRISWDALKEQWGQGYNRDRNFKRDFAEEIAQIKEIFPKLPIELREEGCVIKPAGTNALAIPARRTVRR*