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SCNpilot_expt_1000_bf_scaffold_5483_curated_5

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: 1876..2733

Top 3 Functional Annotations

Value Algorithm Source
2-dehydro-3-deoxyphosphooctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078566}; EC=2.5.1.55 {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078538};; 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00056}; KDO-8-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00056}; Phospho-2-dehydro-3-deoxyoctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiace similarity UNIPROT
DB: UniProtKB
  • Identity: 80.0
  • Coverage: 285.0
  • Bit_score: 460
  • Evalue 2.30e-126
kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (EC:2.5.1.55); K01627 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] similarity KEGG
DB: KEGG
  • Identity: 79.3
  • Coverage: 285.0
  • Bit_score: 454
  • Evalue 2.20e-125
2-dehydro-3-deoxyphosphooctonate aldolase n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SE95_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 80.0
  • Coverage: 285.0
  • Bit_score: 460
  • Evalue 1.70e-126

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Taxonomy

Hyphomicrobium nitrativorans → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 858
ATGAGCAGCGATCAAACGCTTCGGCCCAATTCGGAGGTCCGTGTCGGCGACGTCACGTTCGGTGCTCGCCGTCCCGTTGCCGTCTTTGCCGGGCCTTGCCAGATGGAGAGCCGCGCCCACGCCCTCGAGATGGCGAGTGCGCTGAAGGAGATTGCGGCGCGTCTCGGCTTGGGGCTTGTCTACAAGACGAGCTTCGACAAGGCGAACCGCACGTCGCTCTCGGGAAAGCGCGGCATGGGCCTTTCAGCCGCGCTCGACGTGTTCTCGGAGATCCGCTCGAACCTCGGGCTTCCCGTCGTGACGGATGTGCATGAGGCCGCGCAATGCGCGACGCTTGCCGAGGTCGTCGATGTCCTGCAGATCCCGGCCTTCATGTGCCGCCAGACCGACCTCCTCGTCGCAGCGGCAAAGACCGGCCGGGTGGTCAAGGTCAAGAAGGGGCAGTTCCTCGCGCCCTGGGACATGAAAAACGTCGTCGCCAAGATTACCGGCAGCGGCAACCCGAACGTGCTCGTCACCGAGCGCGGCGCTTCCTTCGGCTACAACACGCTCGTCGTGGACATGCGATCGCTGCCGATCATGGCTGAGACGGGCGCGCCCGTGATCTTCGATGCCACGCATTCGGTCCAGCAGCCGGGCGGACAGGGCACCAGCTCAGGCGGCGATCGCCGGTACGTGCCGGTGCTCGCGCGGGCGGCCGTGGCCGTTGGCGTTTCGGGGCTTTTCATCGAGACGCACCAGGATCCCGACAACGCACCCTCGGACGGCCCGAACATGGTGCCGCTCAAGGATTTTGAGGGGCTTATGCGCGAGCTGATGGCCATCGATGCGCTGGTCAAGGGGCGTGTGCCGGCCTGA
PROTEIN sequence
Length: 286
MSSDQTLRPNSEVRVGDVTFGARRPVAVFAGPCQMESRAHALEMASALKEIAARLGLGLVYKTSFDKANRTSLSGKRGMGLSAALDVFSEIRSNLGLPVVTDVHEAAQCATLAEVVDVLQIPAFMCRQTDLLVAAAKTGRVVKVKKGQFLAPWDMKNVVAKITGSGNPNVLVTERGASFGYNTLVVDMRSLPIMAETGAPVIFDATHSVQQPGGQGTSSGGDRRYVPVLARAAVAVGVSGLFIETHQDPDNAPSDGPNMVPLKDFEGLMRELMAIDALVKGRVPA*