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SCNpilot_cont_1000_p_scaffold_9203_curated

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_9203_curated_1
unknown

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3..146
DNA (144bp) protein (48aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_9203_curated_2
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

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322..2253
DNA (1932bp) protein (644aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
ATP-dependent metalloprotease FtsH; K03798 cell division protease FtsH [EC:3.4.24.-]
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HV07_PARL1
SCNpilot_cont_1000_p_scaffold_9203_curated_3
Elizabethkingia sp. BM10, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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2470..2754
DNA (285bp) protein (95aa)
hypothetical protein n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B77F30
Uncharacterized protein {ECO:0000313|EMBL:AJW61807.1}; TaxID=722877 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia sp. BM10.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_9203_curated_4
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

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2754..3566
DNA (813bp) protein (271aa)
Dihydropteroate synthase {ECO:0000256|RuleBase:RU361205, ECO:0000313|EMBL:CDO58899.1}; Short=DHPS {ECO:0000256|RuleBase:RU361205};; EC=2.5.1.15 {ECO:0000256|RuleBase:RU361205, ECO:0000313|EMBL:CDO58899.1};; Dihydropteroate pyrophosphorylase {ECO:0000256|RuleBase:RU361205}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
dihydropteroate synthase; K00796 dihydropteroate synthase [EC:2.5.1.15]
Dihydropteroate synthase n=1 Tax=alpha proteobacterium IMCC14465 RepID=J9DWQ5_9PROT
SCNpilot_cont_1000_p_scaffold_9203_curated_5
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

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3675..5018
DNA (1344bp) protein (448aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|SAAS:SAAS00078319}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|SAAS:SAAS00078300};; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
phosphoglucosamine mutase; K03431 phosphoglucosamine mutase [EC:5.4.2.10]
Phosphoglucosamine mutase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=GLMM_PARL1 rbh
SCNpilot_cont_1000_p_scaffold_9203_curated_6
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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5023..5811
DNA (789bp) protein (263aa)
phosphomethylpyrimidine kinase (EC:2.7.4.7); K00941 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
Phosphomethylpyrimidine kinase n=2 Tax=Rhodospirillum rubrum RepID=G2TEE8_RHORU
Hydroxymethylpyrimidine phosphate kinase ThiD {ECO:0000313|EMBL:EYF04518.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
SCNpilot_cont_1000_p_scaffold_9203_curated_7
unknown

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comp(5814..5966)
DNA (153bp) protein (51aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_9203_curated_8
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6072..6761)
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z9N6_AZOL4
Membrane protein {ECO:0000313|EMBL:KJR65618.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
putative protein disulfide oxidoreductase
SCNpilot_cont_1000_p_scaffold_9203_curated_9
unknown

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comp(6777..6875)
DNA (99bp) protein (33aa)

This feature has no annotations

Displaying 9 items

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