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SCNpilot_cont_1000_p_scaffold_673_curated

Search features with annotation key words

Displaying items 31-58 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_673_curated_31
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26788..27720)
DNA (933bp) protein (311aa)
Hsp33 protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HQ44_PARL1
Hsp33 protein; K04083 molecular chaperone Hsp33
33 kDa chaperonin {ECO:0000256|SAAS:SAAS00038673}; Flags: Precursor;; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCNpilot_cont_1000_p_scaffold_673_curated_32
Methylobacterium populi, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27777..28712)
DNA (936bp) protein (312aa)
Ornithine carbamoyltransferase, catabolic {ECO:0000256|HAMAP-Rule:MF_01109}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109};; TaxID=441620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001).;"
Ornithine carbamoyltransferase, catabolic n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1ZGX7_METPB
ornithine carbamoyltransferase
SCNpilot_cont_1000_p_scaffold_673_curated_33
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28709..29923)
DNA (1215bp) protein (405aa)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
acetylornithine and succinylornithine aminotransferase; K00821 acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
acetylornithine aminotransferase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003642A9B
SCNpilot_cont_1000_p_scaffold_673_curated_34
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

30352..30816
DNA (465bp) protein (155aa)
Global cell cycle regulator GcrA n=1 Tax=Maricaulis maris (strain MCS10) RepID=Q0ASF9_MARMM
GcrA cell cycle regulator {ECO:0000313|EMBL:KIF25106.1}; TaxID=1245923 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
global cell cycle regulator GcrA; K13583 GcrA cell cycle regulator
SCNpilot_cont_1000_p_scaffold_673_curated_35
Burkholderia rhizoxinica, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30970..31446
DNA (477bp) protein (159aa)
glutathione peroxidase (EC:1.11.1.9); K00432 glutathione peroxidase [EC:1.11.1.9]
Glutathione peroxidase n=1 Tax=Burkholderia rhizoxinica (strain DSM 19002 / CIP 109453 / HKI 454) RepID=E5AQX3_BURRH
Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}; TaxID=882378 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia rhizoxinica (strain DSM 19002 / CIP 109453 / HKI 454).;"
SCNpilot_cont_1000_p_scaffold_673_curated_36
unknown

Not on your lists

31563..31766
DNA (204bp) protein (68aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_673_curated_37
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31770..32492)
DNA (723bp) protein (241aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HQ39_PARL1
two component transcriptional regulator; K07657 two-component system, OmpR family, phosphate regulon response regulator PhoB
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ABS62022.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCNpilot_cont_1000_p_scaffold_673_curated_38
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32489..33199)
DNA (711bp) protein (237aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HQ38_PARL1
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
phosphate uptake regulator PhoU; K02039 phosphate transport system protein
SCNpilot_cont_1000_p_scaffold_673_curated_39
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33275..34576)
DNA (1302bp) protein (434aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121, ECO:0000313|EMBL:CDO60106.1};; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
two-component sensor histidine kinase; K07636 two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
Signal transduction histidine kinase n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4U2Z2_9PROT
SCNpilot_cont_1000_p_scaffold_673_curated_40
R_Brevundimonas_68_13, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35145..35558
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000360BE9E
PAS/PAC sensor hybrid histidine kinase
Tax=RIFCSPHIGHO2_12_FULL_Brevundimonas_68_13_curated
SCNpilot_cont_1000_p_scaffold_673_curated_41
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35590..36006)
DNA (417bp) protein (139aa)
peptidyl-tRNA hydrolase n=1 Tax=Dyella japonica RepID=UPI000315522A
Uncharacterized protein {ECO:0000313|EMBL:KFN46371.1}; TaxID=1384056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli CF5-1.;"
protein chain release factor B
SCNpilot_cont_1000_p_scaffold_673_curated_42
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36003..37700)
DNA (1698bp) protein (566aa)
long-chain-fatty-acid--CoA ligase; K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3]
PREDICTED: probable 4-coumarate--CoA ligase 2-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C141EE
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
SCNpilot_cont_1000_p_scaffold_673_curated_43
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37745..38965
DNA (1221bp) protein (407aa)
Penicillin-binding protein, beta-lactamase class C n=1 Tax=Caulobacter crescentus OR37 RepID=R0EH59_CAUCE
Penicillin-binding protein, beta-lactamase class C {ECO:0000313|EMBL:ENZ81374.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
beta-lactamase
SCNpilot_cont_1000_p_scaffold_673_curated_44
Burkholderia sp. TJI49, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38962..39840
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. TJI49 RepID=F0G8A1_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGD02280.1}; TaxID=987057 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. TJI49.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_673_curated_45
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39837..40661)
DNA (825bp) protein (275aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E4263D
Chemotaxis protein CheR {ECO:0000313|EMBL:AIB14689.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
cheR; chemotaxis methyltransferase CheR
SCNpilot_cont_1000_p_scaffold_673_curated_46
Roseibium sp. TrichSKD4, Roseibium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40672..41043)
DNA (372bp) protein (124aa)
chemotaxis protein CheY n=1 Tax=Ponticaulis koreensis RepID=UPI0003B35026
Chemotaxis protein CheY {ECO:0000313|EMBL:EFO31580.1}; TaxID=744980 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseibium.;" source="Roseibium sp. TrichSKD4.;"
cheY; response regulator receiver domain-containing protein (CheY-like); K03413 two-component system, chemotaxis family, response regulator CheY
SCNpilot_cont_1000_p_scaffold_673_curated_47
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41140..41772)
DNA (633bp) protein (211aa)
histidine phosphotransferase n=1 Tax=Pannonibacter phragmitetus RepID=UPI00036C9E06
hypothetical protein; K13588 histidine phosphotransferase ChpT
Blr2191 protein {ECO:0000313|EMBL:BAC47456.1}; TaxID=224911 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC; 14792 / USDA 110).;"
SCNpilot_cont_1000_p_scaffold_673_curated_48
Magnetospirillum sp. SO-1, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41844..42635
DNA (792bp) protein (264aa)
3'(2'),5'-bisphosphate nucleotidase; K01082 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI0003780710
3'(2'),5'-bisphosphate nucleotidase {ECO:0000313|EMBL:EME69337.1}; TaxID=1244869 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum sp. SO-1.;"
SCNpilot_cont_1000_p_scaffold_673_curated_49
BJP_IG2103_Rhodocyclales_63_50, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43072..43863)
DNA (792bp) protein (264aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI0002885360
hypothetical protein
Tax=BJP_IG2103_Rhodocyclales_63_50
SCNpilot_cont_1000_p_scaffold_673_curated_50
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44580..44810)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TXK6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCE11194.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
signal peptide
SCNpilot_cont_1000_p_scaffold_673_curated_51
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

44916..45503
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Oceanicaulis alexandrii RepID=UPI0003B649C7
Uncharacterized protein {ECO:0000313|EMBL:KIF22807.1}; TaxID=1245923 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_673_curated_52
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45564..45722
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0SUN2_CAUSK
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
SCNpilot_cont_1000_p_scaffold_673_curated_53
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45732..46706)
DNA (975bp) protein (325aa)
Protein-export membrane protein SecF n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6ISI3_RHOCS
secF; protein-export membrane protein SecF; K03074 preprotein translocase subunit SecF
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
SCNpilot_cont_1000_p_scaffold_673_curated_54
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46901..47362
DNA (462bp) protein (154aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00037620C2
Uncharacterized protein {ECO:0000313|EMBL:KJC44829.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
SCNpilot_cont_1000_p_scaffold_673_curated_55
Pseudomonas chlororaphis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47363..48610)
DNA (1248bp) protein (416aa)
MFS transporter n=1 Tax=Pseudomonas chlororaphis RepID=UPI0002ED33E2
MFS transporter {ECO:0000313|EMBL:AIC20474.1}; TaxID=587753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas chlororaphis.;"
putative 2-ketogluconate transporter
SCNpilot_cont_1000_p_scaffold_673_curated_56
unknown

Not on your lists

48858..49352
DNA (495bp) protein (165aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_673_curated_57
Sphingobium chinhatense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49409..49831
DNA (423bp) protein (141aa)
Uncharacterized protein n=3 Tax=Sphingobium RepID=D4Z896_SPHJU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPR15255.1}; TaxID=1346790 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chinhatense IP26.;"
SCNpilot_cont_1000_p_scaffold_673_curated_58
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49839..50771)
DNA (933bp) protein (311aa)
Putative membrane-associated protein n=1 Tax=Polaromonas sp. CF318 RepID=J2KAY6_9BURK
Putative membrane-associated protein {ECO:0000313|EMBL:EJL77410.1}; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
hypothetical protein
Displaying items 31-58 of 58 in total

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