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SCNpilot_cont_1000_p_scaffold_673_curated

Search features with annotation key words

Displaying items 1-30 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_673_curated_1
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..222)
DNA (222bp) protein (74aa)
rocD; ornithine--oxo-acid transaminase (EC:2.6.1.13); K00819 ornithine--oxo-acid transaminase [EC:2.6.1.13]
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=1328306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. Mim1.;"
Acetylornithine aminotransferase n=1 Tax=Rhizobium etli bv. mimosae str. Mim1 RepID=S5S1I9_RHIET
SCNpilot_cont_1000_p_scaffold_673_curated_2
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(228..1190)
DNA (963bp) protein (321aa)
Amidinotransferase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RA15_PHEZH
amidinotransferase
Amidinotransferase {ECO:0000313|EMBL:ACG79519.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
SCNpilot_cont_1000_p_scaffold_673_curated_3
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1205..1618
DNA (414bp) protein (138aa)
Transcriptional regulator, AsnC family n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RA14_PHEZH
transcriptional regulator, AsnC family
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
SCNpilot_cont_1000_p_scaffold_673_curated_4
unknown

Not on your lists

comp(1615..1845)
DNA (231bp) protein (77aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_673_curated_5
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2219..3043)
DNA (825bp) protein (275aa)
cpo; non-heme chloroperoxidase (EC:1.11.1.10); K00433 chloride peroxidase [EC:1.11.1.10]
PREDICTED: uncharacterized protein LOC102325877 n=1 Tax=Pantholops hodgsonii RepID=UPI0003C1B0BA
Putative non-heme chloroperoxidase {ECO:0000313|EMBL:EHJ95058.1}; TaxID=1107544 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens 5A.;"
SCNpilot_cont_1000_p_scaffold_673_curated_6
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3218..4291
DNA (1074bp) protein (358aa)
ttuC; tartrate dehydrogenase/decarboxylase (EC:1.1.1.83 1.1.1.93 4.1.1.73); K07246 tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
Tartrate dehydrogenase/decarboxylase n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4Z659_9BRAD
Bradyrhizobium elkanii strain UASWS1015 Contig180, whole genome shotgun sequence {ECO:0000313|EMBL:KIU47320.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
SCNpilot_cont_1000_p_scaffold_673_curated_7
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4298..4786)
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Duganella zoogloeoides RepID=UPI000370A5EC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN82795.1}; TaxID=1331671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida H8234.;"
SCNpilot_cont_1000_p_scaffold_673_curated_8
bacterium YEK0313, Bacteria

Not on your lists

comp(4816..5244)
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI000381652B
Gluconate 2-dehydrogenase cytochrome c subunit {ECO:0000313|EMBL:CEJ10209.1}; Flags: Precursor;; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
cytochrome C, class I
SCNpilot_cont_1000_p_scaffold_673_curated_9
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5241..6863)
DNA (1623bp) protein (541aa)
amine oxidase, flavin-containing; K00274 monoamine oxidase [EC:1.4.3.4]
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI000362FED3
Amine oxidase, flavin-containing {ECO:0000313|EMBL:ACJ01263.1}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
SCNpilot_cont_1000_p_scaffold_673_curated_10
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7164..8765
DNA (1602bp) protein (534aa)
peptidase M28 n=1 Tax=Sphingomonas wittichii RepID=UPI0002F57182
peptidase M28
Peptidase M28 {ECO:0000313|EMBL:ABQ68185.1}; Flags: Precursor;; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
SCNpilot_cont_1000_p_scaffold_673_curated_11
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8857..9795
DNA (939bp) protein (313aa)
iunH; inosine-uridine preferring nucleoside hydrolase (EC:3.2.2.1)
Exported nucleosidase-like glycosylase n=1 Tax=Azospirillum amazonense Y2 RepID=G1XVI0_9PROT
Exported nucleosidase-like glycosylase {ECO:0000313|EMBL:EGY02726.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;"
SCNpilot_cont_1000_p_scaffold_673_curated_12
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9961..11730
DNA (1770bp) protein (590aa)
hypothetical protein n=1 Tax=Synechococcus sp. PCC 7336 RepID=UPI000347D1F0
Putative O-linked N-acetylglucosamine transferase, SPINDLY family {ECO:0000313|EMBL:EJN09707.1}; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
tetratricopeptide tpr_1 repeat-containing protein
SCNpilot_cont_1000_p_scaffold_673_curated_13
Burkholderia caribensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11747..12667)
DNA (921bp) protein (307aa)
hypothetical protein n=1 Tax=gamma proteobacterium WG36 RepID=UPI00035CEF17
Putative 2-pyrone-4,6-dicarboxylic acid hydrolase {ECO:0000313|EMBL:ETY84100.2}; TaxID=1323664 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia caribensis MBA4.;"
putative amidohydrolase
SCNpilot_cont_1000_p_scaffold_673_curated_14
Brevundimonas abyssalis, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12782..13657
DNA (876bp) protein (292aa)
Oxygen-dependent coproporphyrinogen-III oxidase {ECO:0000256|HAMAP-Rule:MF_00333}; Short=CPO {ECO:0000256|HAMAP-Rule:MF_00333};; Short=Coprogen oxidase {ECO:0000256|HAMAP-Rule:MF_00333};; Short=Coproporphyrinogenase {ECO:0000256|HAMAP-Rule:MF_00333};; EC=1.3.3.3 {ECO:0000256|HAMAP-Rule:MF_00333};; TaxID=1391729 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas abyssalis TAR-001.;"
coproporphyrinogen oxidase (EC:1.3.3.3); K00228 coproporphyrinogen III oxidase [EC:1.3.3.3]
Coproporphyrinogen-III oxidase, aerobic n=1 Tax=Brevundimonas abyssalis TAR-001 RepID=U2Z8W9_9CAUL
SCNpilot_cont_1000_p_scaffold_673_curated_15
alpha proteobacterium U9-1i, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13654..14613
DNA (960bp) protein (320aa)
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260, ECO:0000256|SAAS:SAAS00018413};; Hydroxymethylbilane synthase {ECO:0000256|HAMAP-Rule:MF_00260}; Pre-uroporphyrinogen synthase {ECO:0000256|HAMAP-Rule:MF_00260}; TaxID=1605283 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium U9-1i.;"
porphobilinogen deaminase; K01749 hydroxymethylbilane synthase [EC:2.5.1.61]
porphobilinogen deaminase n=1 Tax=Maricaulis sp. JL2009 RepID=UPI0003A25F22
SCNpilot_cont_1000_p_scaffold_673_curated_16
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(14738..15913)
DNA (1176bp) protein (392aa)
lldD; L-lactate dehydrogenase (FMN-dependent) related enzyme; K00101 L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3] rbh
L-lactate dehydrogenase (FMN-dependent) related enzyme n=1 Tax=Prochlorococcus marinus (strain SARG / CCMP1375 / SS120) RepID=Q7V9S3_PROMA
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
SCNpilot_cont_1000_p_scaffold_673_curated_17
unknown

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comp(15989..16177)
DNA (189bp) protein (63aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_673_curated_18
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16211..17200)
DNA (990bp) protein (330aa)
Lysophospholipase n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2YBM0_9PROT
Lysophospholipase {ECO:0000313|EMBL:EWY40457.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
lysophospholipase
SCNpilot_cont_1000_p_scaffold_673_curated_19
unknown

Not on your lists

comp(17201..17302)
DNA (102bp) protein (34aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_673_curated_20
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17311..18468)
DNA (1158bp) protein (386aa)
Na+ dependent nucleoside transporter domain protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HS07_PARL1
Na+ dependent nucleoside transporter {ECO:0000313|EMBL:GAK45215.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
Na+ dependent nucleoside transporter; K03317 concentrative nucleoside transporter, CNT family
SCNpilot_cont_1000_p_scaffold_673_curated_21
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18631..19863
DNA (1233bp) protein (411aa)
Acyltransferase 3 n=1 Tax=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) RepID=D9QH34_BRESC
Uncharacterized protein {ECO:0000313|EMBL:KJB93136.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
acyltransferase
SCNpilot_cont_1000_p_scaffold_673_curated_22
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19890..20801
DNA (912bp) protein (304aa)
HlyD family secretion protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RGS9_PHEZH
HlyD family secretion protein
HlyD family secretion protein {ECO:0000313|EMBL:ACG77295.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
SCNpilot_cont_1000_p_scaffold_673_curated_23
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20923..21570
DNA (648bp) protein (216aa)
Putative GCN5-related N-acetyltransferase n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AR60_AZOBR
putative GCN5-related N-acetyltransferase
Putative GCN5-related N-acetyltransferase {ECO:0000313|EMBL:CCC99921.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
SCNpilot_cont_1000_p_scaffold_673_curated_24
unknown

Not on your lists

comp(21580..21777)
DNA (198bp) protein (66aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_673_curated_25
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21871..22389)
DNA (519bp) protein (173aa)
Phosphoglycerate mutase (2,3-diphosphoglycerate-dependent) {ECO:0000256|SAAS:SAAS00055395}; EC=5.4.2.11 {ECO:0000256|SAAS:SAAS00055395};; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
Putative phosphohistidine phosphatase n=1 Tax=Azospirillum brasilense Sp245 RepID=G8ARA0_AZOBR
putative phosphohistidine phosphatase
SCNpilot_cont_1000_p_scaffold_673_curated_26
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22594..23787
DNA (1194bp) protein (398aa)
O-acetylhomoserine sulfhydrylase / O-succinylhomoserine sulfhydrylase {ECO:0000313|EMBL:CDO60127.1}; EC=2.5.1.48 {ECO:0000313|EMBL:CDO60127.1};; EC=2.5.1.49 {ECO:0000313|EMBL:CDO60127.1};; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
O-succinylhomoserine sulfhydrylase; K10764 O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
O-succinylhomoserine sulfhydrylase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HQ49_PARL1
SCNpilot_cont_1000_p_scaffold_673_curated_27
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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23950..24393
DNA (444bp) protein (148aa)
OsmC family protein n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2Q030_KRIFD
OsmC family protein
OsmC family protein {ECO:0000313|EMBL:ADB30028.1}; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
SCNpilot_cont_1000_p_scaffold_673_curated_28
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24466..24858
DNA (393bp) protein (131aa)
Protein ApaG n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=APAG_PARL1
apaG; ApaG protein; K06195 ApaG protein
Protein ApaG {ECO:0000255|HAMAP-Rule:MF_00791}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCNpilot_cont_1000_p_scaffold_673_curated_29
Rhodospirillum rubrum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24924..25514
DNA (591bp) protein (197aa)
folE; GTP cyclohydrolase I (EC:3.5.4.16); K01495 GTP cyclohydrolase I [EC:3.5.4.16]
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; TaxID=269796 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG; 4362 / NCIB 8255 / S1).;"
GTP cyclohydrolase 1 n=2 Tax=Rhodospirillum rubrum RepID=G2T6Z0_RHORU
SCNpilot_cont_1000_p_scaffold_673_curated_30
alpha proteobacterium Q-1, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25511..26671
DNA (1161bp) protein (387aa)
Acetylornithine deacetylase {ECO:0000256|SAAS:SAAS00063950}; EC=3.-.-.- {ECO:0000256|SAAS:SAAS00279026};; EC=3.5.1.- {ECO:0000256|SAAS:SAAS00279018};; EC=3.5.1.16 {ECO:0000256|SAAS:SAAS00063953};; TaxID=1492281 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium Q-1.;"
acetylornithine deacetylase ArgE; K01438 acetylornithine deacetylase [EC:3.5.1.16]
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI000380DBF2
Displaying items 1-30 of 58 in total

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