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SCNpilot_cont_1000_p_scaffold_2767_curated

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_2767_curated_1
alpha proteobacterium U9-1i, Alphaproteobacteria, Proteobacteria, Bacteria

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1..699
DNA (699bp) protein (233aa)
Phosphoribosylglycinamide formyltransferase 2 {ECO:0000256|HAMAP-Rule:MF_01643, ECO:0000256|SAAS:SAAS00083136}; Short=GART 2 {ECO:0000256|HAMAP-Rule:MF_01643};; EC=2.1.2.- {ECO:0000256|HAMAP-Rule:MF_01643, ECO:0000256|SAAS:SAAS00083135};; 5'-phosphoribosylglycinamide transformylase 2 {ECO:0000256|HAMAP-Rule:MF_01643}; Formate-dependent GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01643}; GAR transformylase 2 {ECO:0000256|HAMAP-Rule:MF_01643}; TaxID=1605283 species="Bacteria; Proteobacteria; Alphaproteobact
phosphoribosylglycinamide formyltransferase; K08289 phosphoribosylglycinamide formyltransferase 2 [EC:2.1.2.2]
Phosphoribosylglycinamide formyltransferase 2 n=1 Tax=Thauera sp. 28 RepID=N6YNS9_9RHOO
SCNpilot_cont_1000_p_scaffold_2767_curated_2
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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802..2010
DNA (1209bp) protein (403aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
Two-component sensor histidine kinase n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AF80_AZOBR
two-component sensor histidine kinase
SCNpilot_cont_1000_p_scaffold_2767_curated_3
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2022..3314)
DNA (1293bp) protein (431aa)
ABC transporter nucleotide binding/ATPase protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IXD2_POLGS
ABC transporter permease/ATPase; K02049 NitT/TauT family transport system ATP-binding protein
ABC transporter nucleotide binding/ATPase protein {ECO:0000313|EMBL:ADZ70450.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCNpilot_cont_1000_p_scaffold_2767_curated_4
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3370..5094)
DNA (1725bp) protein (575aa)
Putative nitrate transport system permease protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IXD3_POLGS
nitrate transporter permease; K02050 NitT/TauT family transport system permease protein
Putative nitrate transport system permease protein {ECO:0000313|EMBL:ADZ70452.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCNpilot_cont_1000_p_scaffold_2767_curated_5
alpha proteobacterium IMCC14465, Alphaproteobacteria, Proteobacteria, Bacteria

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5710..7275
DNA (1566bp) protein (522aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00049060}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00085331};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_01025}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025}; TaxID=1220535 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium IMCC14465.;"
2-isopropylmalate synthase n=1 Tax=alpha proteobacterium IMCC14465 RepID=J9DHN0_9PROT
2-isopropylmalate synthase
SCNpilot_cont_1000_p_scaffold_2767_curated_6
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7406..8449
DNA (1044bp) protein (348aa)
Cell shape determining protein, MreB/Mrl family n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HW05_PARL1
rod shape-determining protein MreB; K03569 rod shape-determining protein MreB and related proteins
Cell shape determining protein, MreB/Mrl family {ECO:0000313|EMBL:ABS64088.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCNpilot_cont_1000_p_scaffold_2767_curated_7
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8480..9541
DNA (1062bp) protein (354aa)
Cell shape-determining protein MreC n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HW06_PARL1
rod shape-determining protein MreC; K03570 rod shape-determining protein MreC
Rod shape-determining protein MreC {ECO:0000313|EMBL:ABS64089.1}; Flags: Precursor;; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCNpilot_cont_1000_p_scaffold_2767_curated_8
R_Alphaproteobacteria_63_12, Alphaproteobacteria, Proteobacteria, Bacteria

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9547..10098
DNA (552bp) protein (184aa)
Cell shape-determining protein n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TIL4_TISMK
Cell shape-determining protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_63_12_curated
SCNpilot_cont_1000_p_scaffold_2767_curated_9
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

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10098..12032
DNA (1935bp) protein (645aa)
Peptidoglycan glycosyltransferase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HW08_PARL1
Peptidoglycan glycosyltransferase {ECO:0000313|EMBL:GAK44819.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
peptidoglycan glycosyltransferase; K05515 penicillin-binding protein 2
SCNpilot_cont_1000_p_scaffold_2767_curated_10
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

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12032..13000
DNA (969bp) protein (323aa)
Rod shape-determining protein RodA n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HW09_PARL1
Rod shape-determining protein RodA {ECO:0000313|EMBL:GAK44818.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
rod shape-determining protein RodA; K05837 rod shape determining protein RodA
Displaying 10 items

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