ggKbase home page

SCNpilot_cont_1000_p_scaffold_5252_curated

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_5252_curated_1
unknown

Not on your lists

comp(2..382)
DNA (381bp) protein (127aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_5252_curated_2

Not on your lists

557..1546
DNA (990bp) protein (330aa)
Putative uncharacterized protein n=1 Tax=uncultured marine bacterium 105 RepID=Q6SI23_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:AAR37449.1}; TaxID=257382 species="Bacteria; environmental samples.;" source="uncultured marine bacterium 105.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_5252_curated_3
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

1665..2684
DNA (1020bp) protein (340aa)
40-residue YVTN family beta-propeller repeat protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q021R8_SOLUE
YVTN beta-propeller repeat-containing protein
40-residue YVTN family beta-propeller repeat protein {ECO:0000313|EMBL:ABJ84307.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SCNpilot_cont_1000_p_scaffold_5252_curated_4
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2719..4233
DNA (1515bp) protein (505aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NQH2_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS30669.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
signal peptide
SCNpilot_cont_1000_p_scaffold_5252_curated_5
Cycloclasticus zancles, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4230..4880)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Cycloclasticus zancles 7-ME RepID=S5TX96_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGS39760.1}; TaxID=1198232 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cycloclasticus.;" source="Cycloclasticus zancles 7-ME.;"
SCNpilot_cont_1000_p_scaffold_5252_curated_6
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4943..5584)
DNA (642bp) protein (214aa)
3-oxoacid CoA-transferase subunit B (EC:2.8.3.5); K01029 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
3-oxoacid CoA-transferase, B subunit {ECO:0000313|EMBL:ADG10809.1}; EC=2.8.3.5 {ECO:0000313|EMBL:ADG10809.1};; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC; 15250 / LMG 17158 / TK0059) (Mycoplana segnis).;"
3-oxoacid CoA-transferase, B subunit n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VDG9_CAUST
SCNpilot_cont_1000_p_scaffold_5252_curated_7
Sphingobium lucknowense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5584..6324)
DNA (741bp) protein (247aa)
acetate/3-ketoacid CoA transferase subunit A; K01028 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
3-oxoacid CoA-transferase subunit A n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5ZKB1_9PROT
Succinyl-CoA:3-ketoacid-CoA transferase {ECO:0000313|EMBL:KER34429.1}; TaxID=1450518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lucknowense F2.;"
SCNpilot_cont_1000_p_scaffold_5252_curated_8
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6457..7926
DNA (1470bp) protein (490aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
histidyl-tRNA synthetase; K01892 histidyl-tRNA synthetase [EC:6.1.1.21]
Histidine--tRNA ligase n=1 Tax=Parvularcula bermudensis (strain ATCC BAA-594 / HTCC2503 / KCTC 12087) RepID=E0TGP0_PARBH
Displaying 8 items

View Taxonomy