ggKbase home page

SCNpilot_cont_1000_p_scaffold_4756_curated

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_4756_curated_1
unknown

Not on your lists

3..257
DNA (255bp) protein (85aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_4756_curated_2
Leminorella grimontii, Leminorella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

517..1935
DNA (1419bp) protein (473aa)
3-methyladenine DNA glycosylase II {ECO:0000313|EMBL:KFC95471.1}; EC=2.1.1.- {ECO:0000313|EMBL:KFC95471.1};; EC=3.2.2.21 {ECO:0000313|EMBL:KFC95471.1};; TaxID=1005999 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Leminorella.;" source="Leminorella grimontii ATCC 33999 = DSM 5078.;"
AraC family transcriptional regulator; K13529 AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
Transcriptional regulator, AraC family n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IUQ0_9BACT
SCNpilot_cont_1000_p_scaffold_4756_curated_3
Asticcacaulis sp. AC460, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1932..2438
DNA (507bp) protein (169aa)
ogt; methylated-DNA-[protein]-cysteine S-methyltransferase (EC:2.1.1.63)
Uncharacterized protein n=1 Tax=Asticcacaulis sp. AC460 RepID=V4P5Q2_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:ESQ89277.1}; TaxID=1282360 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis sp. AC460.;"
SCNpilot_cont_1000_p_scaffold_4756_curated_4
Burkholderiales bacterium GJ-E10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2558..4768)
DNA (2211bp) protein (737aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI000365D1D9
TonB-dependent receptor {ECO:0000313|EMBL:BAP89889.1}; TaxID=1469502 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium GJ-E10.;"
TonB-dependent receptor
SCNpilot_cont_1000_p_scaffold_4756_curated_5
unknown

Not on your lists

comp(4859..5179)
DNA (321bp) protein (107aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_4756_curated_6
Oceanicaulis sp. HTCC2633, Oceanicaulis, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5628..5999
DNA (372bp) protein (124aa)
30S ribosomal protein S12 n=1 Tax=Oceanicaulis sp. HTCC2633 RepID=A3UDB5_9RHOB
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=314254 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Oceanicaulis.;" source="Oceanicaulis sp. HTCC2633.;"
rpsL; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12
SCNpilot_cont_1000_p_scaffold_4756_curated_7
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6016..6486
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4R6C2_9RHIZ
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
30S ribosomal protein S7; K02992 small subunit ribosomal protein S7
SCNpilot_cont_1000_p_scaffold_4756_curated_8
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6504..8579
DNA (2076bp) protein (692aa)
Elongation factor G n=1 Tax=Oceanibaculum indicum P24 RepID=K2IYJ9_9PROT
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
translation elongation factor G; K02355 elongation factor G
Displaying 8 items

View Taxonomy