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SCNpilot_cont_1000_p_scaffold_5774_curated

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_5774_curated_1
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..1914)
DNA (1914bp) protein (638aa)
hypothetical protein n=1 Tax=Novispirillum itersonii RepID=UPI00036659F9
Uncharacterized protein {ECO:0000313|EMBL:CDL00754.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
hypothetical protein; K06894
SCNpilot_cont_1000_p_scaffold_5774_curated_2
Pseudanabaena biceps, Pseudanabaena, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(2035..3333)
DNA (1299bp) protein (433aa)
Metallophosphoesterase n=1 Tax=Pseudanabaena biceps PCC 7429 RepID=L8MTS8_9CYAN
Metallophosphoesterase {ECO:0000313|EMBL:ELS30836.1}; Flags: Precursor;; TaxID=927668 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Pseudanabaena.;" source="Pseudanabaena biceps PCC 7429.;"
serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase
SCNpilot_cont_1000_p_scaffold_5774_curated_3
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3379..5754)
DNA (2376bp) protein (792aa)
TonB-denpendent receptor n=1 Tax=Caulobacter sp. JGI 0001010-J14 RepID=UPI00036CF8DA
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein
TonB-dependent receptor {ECO:0000313|EMBL:ABZ72887.1}; Flags: Precursor;; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_cont_1000_p_scaffold_5774_curated_4
Acidomonas methanolica, Acidomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5860..6414)
DNA (555bp) protein (185aa)
isochorismatase hydrolase; K09020 ureidoacrylate peracid hydrolase [EC:3.5.1.110]
Isochorismatase hydrolase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HRT2_PARL1
Isochorismatase hydrolase {ECO:0000313|EMBL:GAJ29561.1}; TaxID=1231351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidomonas.;" source="Acidomonas methanolica NBRC 104435.;"
SCNpilot_cont_1000_p_scaffold_5774_curated_5
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6411..6722)
DNA (312bp) protein (104aa)
luciferase-like protein; K09018 pyrimidine oxygenase [EC:1.14.99.46]
Flavin-dependent oxidoreductase, methylene-tetrahydromethanopterin reductase n=1 Tax=Caulobacter crescentus OR37 RepID=R0D6D8_CAUCE
Flavin-dependent oxidoreductase, methylene-tetrahydromethanopterin reductase {ECO:0000313|EMBL:ENZ83930.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
SCNpilot_cont_1000_p_scaffold_5774_curated_6
unknown

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7536..8576
DNA (1041bp) protein (347aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_5774_curated_7
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8438..9184)
DNA (747bp) protein (249aa)
GntR family transcriptional regulator n=1 Tax=Caulobacter sp. JGI 0001010-J14 RepID=UPI000368E877
GntR family transcriptional regulator
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
SCNpilot_cont_1000_p_scaffold_5774_curated_8
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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comp(9313..10245)
DNA (933bp) protein (311aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CC630
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
SCNpilot_cont_1000_p_scaffold_5774_curated_9
Salinisphaera hydrothermalis, Salinisphaera, Salinisphaerales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10373..12325)
DNA (1953bp) protein (651aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI000369C15B
Quinoprotein glucose dehydrogenase {ECO:0000313|EMBL:KEZ77780.1}; TaxID=1304275 species="Bacteria; Proteobacteria; Gammaproteobacteria; Salinisphaerales; Salinisphaeraceae; Salinisphaera.;" source="Salinisphaera hydrothermalis C41B8.;"
quinoprotein glucose dehydrogenase
SCNpilot_cont_1000_p_scaffold_5774_curated_10
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12312..12692)
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI0003738A40
Uncharacterized protein {ECO:0000313|EMBL:ESR22851.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
SCNpilot_cont_1000_p_scaffold_5774_curated_11

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comp(12811..13842)
DNA (1032bp) protein (344aa)
NHL repeat containing protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01UV1_SOLUE
NHL repeat-containing protein {ECO:0000313|EMBL:AGU01672.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
NHL repeat-containing protein
SCNpilot_cont_1000_p_scaffold_5774_curated_12

Not on your lists

comp(13856..14215)
DNA (360bp) protein (120aa)
NHL repeat containing protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01UV2_SOLUE
NHL repeat-containing protein {ECO:0000313|EMBL:AGU01673.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
NHL repeat-containing protein
Displaying 12 items

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