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SCNpilot_cont_1000_p_scaffold_4001_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_4001_curated_1
unknown

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comp(1..150)
DNA (150bp) protein (50aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_4001_curated_2
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(277..1308)
DNA (1032bp) protein (344aa)
MscS Mechanosensitive ion channel n=1 Tax=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) RepID=D9QLV6_BRESC
mechanosensitive ion channel MscS
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
SCNpilot_cont_1000_p_scaffold_4001_curated_3
unknown

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1432..2139
DNA (708bp) protein (236aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_4001_curated_4
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2141..3166)
DNA (1026bp) protein (342aa)
Putative oxidoreductase, MocA n=1 Tax=Burkholderia glumae (strain BGR1) RepID=C5AHV0_BURGB
Aldo/keto reductase {ECO:0000313|EMBL:AHX13517.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
putative oxidoreductase, MocA
SCNpilot_cont_1000_p_scaffold_4001_curated_5
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3254..4063)
DNA (810bp) protein (270aa)
Metallophosphoesterase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HUZ3_PARL1
Metallophosphoesterase {ECO:0000313|EMBL:GAK46569.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
metallophosphoesterase; K09769 hypothetical protein
SCNpilot_cont_1000_p_scaffold_4001_curated_6
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4060..4638)
DNA (579bp) protein (193aa)
5-formyltetrahydrofolate cyclo-ligase; K01934 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI00034CA651
SCNpilot_cont_1000_p_scaffold_4001_curated_7
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4924..5286)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HUZ1_PARL1
Cell division protein ZapA {ECO:0000256|SAAS:SAAS00072473}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
hypothetical protein; K09888 cell division protein ZapA
SCNpilot_cont_1000_p_scaffold_4001_curated_8
unknown

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comp(5354..5617)
DNA (264bp) protein (88aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_4001_curated_9
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5791..7806
DNA (2016bp) protein (672aa)
Transketolase {ECO:0000256|RuleBase:RU004996}; EC=2.2.1.1 {ECO:0000256|RuleBase:RU004996};; TaxID=754522 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2012.;"
transketolase; K00615 transketolase [EC:2.2.1.1]
Transketolase n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2012 RepID=J0C4H5_RHILT
SCNpilot_cont_1000_p_scaffold_4001_curated_10
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7843..8853
DNA (1011bp) protein (337aa)
gap; glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium fredii USDA 257.;"
Glyceraldehyde-3-phosphate dehydrogenase Gap n=7 Tax=Sinorhizobium/Ensifer group RepID=I3XCZ7_RHIFR
SCNpilot_cont_1000_p_scaffold_4001_curated_11
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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8891..9928
DNA (1038bp) protein (346aa)
phosphoglycerate kinase (EC:2.7.2.3); K00927 phosphoglycerate kinase [EC:2.7.2.3]
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
Phosphoglycerate kinase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6INX1_9SPHN
Displaying 11 items

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