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SCNpilot_cont_1000_p_scaffold_2681_curated

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_2681_curated_1
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(48..1478)
DNA (1431bp) protein (477aa)
Putative uncharacterized protein id=2161395 bin=GWB2_Desulfobacterales_56_26 species=Rhodospirillum centenum genus=Rhodospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
Tax=GWB2_Desulfobacterales_56_26_curated
SCNpilot_cont_1000_p_scaffold_2681_curated_2
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1626..2048
DNA (423bp) protein (141aa)
succinate dehydrogenase cytochrome b556 subunit (EC:1.3.99.1); K00241 succinate dehydrogenase cytochrome b556 subunit
Succinate dehydrogenase cytochrome b556 subunit n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BQC4_GRABC
Succinate dehydrogenase {ECO:0000313|EMBL:KGM55885.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
SCNpilot_cont_1000_p_scaffold_2681_curated_3
Brucella suis, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2045..2416
DNA (372bp) protein (124aa)
Succinate dehydrogenase hydrophobic membrane anchor n=6 Tax=Brucella RepID=C9T3W2_9RHIZ
succinate dehydrogenase, hydrophobic membrane anchor protein; K00242 succinate dehydrogenase membrane anchor subunit
Succinate dehydrogenase {ECO:0000313|EMBL:AJM85563.1}; TaxID=29461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella suis.;"
SCNpilot_cont_1000_p_scaffold_2681_curated_4
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

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2424..4214
DNA (1791bp) protein (597aa)
Succinate dehydrogenase flavoprotein subunit {ECO:0000256|RuleBase:RU362051}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU362051};; TaxID=1245923 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
sdhA; succinate dehydrogenase flavoprotein subunit; K00239 succinate dehydrogenase flavoprotein subunit [EC:1.3.99.1]
Succinate dehydrogenase, flavoprotein subunit n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HT22_PARL1
SCNpilot_cont_1000_p_scaffold_2681_curated_5
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4384..4803
DNA (420bp) protein (140aa)
LuxR family transcriptional regulator n=1 Tax=Sphingomonas elodea RepID=UPI0002631AC4
Bacterial regulatory s, luxR family protein {ECO:0000313|EMBL:KGB52527.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
LuxR family transcriptional regulator
SCNpilot_cont_1000_p_scaffold_2681_curated_6
R_Gammaproteobacteria_42_13, Gammaproteobacteria, Proteobacteria, Bacteria

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5065..5529
DNA (465bp) protein (155aa)
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_42_13_curated
SCNpilot_cont_1000_p_scaffold_2681_curated_7
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

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5687..6316
DNA (630bp) protein (210aa)
hypothetical protein n=1 Tax=Oceanicaulis alexandrii RepID=UPI0003B73C22
Uncharacterized protein {ECO:0000313|EMBL:CDO58407.1}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
SCNpilot_cont_1000_p_scaffold_2681_curated_8
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6303..6830)
DNA (528bp) protein (176aa)
Transferase hexapeptide repeat containing protein n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EL64_METSB
transferase hexapeptide repeat containing protein
Transferase hexapeptide repeat containing protein {ECO:0000313|EMBL:ACK49059.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
SCNpilot_cont_1000_p_scaffold_2681_curated_9
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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7052..7798
DNA (747bp) protein (249aa)
Phosphate starvation-inducible protein PhoH, ATPase n=1 Tax=Oceanibaculum indicum P24 RepID=K2K5R8_9PROT
Phosphate starvation-inducible protein PhoH, ATPase {ECO:0000313|EMBL:EKE78199.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
putative phosphate starvation-inducible protein with ATPase activity, PhoH-like
SCNpilot_cont_1000_p_scaffold_2681_curated_10
unknown

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comp(7830..8114)
DNA (285bp) protein (95aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_2681_curated_11
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8437..9165
DNA (729bp) protein (243aa)
Uncharacterized protein {ECO:0000313|EMBL:CDO58418.1}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
SCNpilot_cont_1000_p_scaffold_2681_curated_12
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9229..9459)
DNA (231bp) protein (77aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI000372BA63
Conserved protein {ECO:0000313|EMBL:GAK46062.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_2681_curated_13
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9553..10371)
DNA (819bp) protein (273aa)
serine O-acetyltransferase; K00640 serine O-acetyltransferase [EC:2.3.1.30]
Serine O-acetyltransferase {ECO:0000313|EMBL:ABS64232.1}; EC=2.3.1.30 {ECO:0000313|EMBL:ABS64232.1};; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
Serine O-acetyltransferase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HWE9_PARL1
SCNpilot_cont_1000_p_scaffold_2681_curated_14
unknown

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comp(10420..10581)
DNA (162bp) protein (54aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_2681_curated_15
Maricaulis maris, Maricaulis, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10925..11527
DNA (603bp) protein (201aa)
Nitroreductase n=1 Tax=Maricaulis maris (strain MCS10) RepID=Q0AQT3_MARMM
nitroreductase
Nitroreductase {ECO:0000313|EMBL:ABI65354.1}; TaxID=394221 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Maricaulis.;" source="Maricaulis maris (strain MCS10).;"
SCNpilot_cont_1000_p_scaffold_2681_curated_16
alpha proteobacterium Q-1, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11708..12343)
DNA (636bp) protein (212aa)
7-carboxy-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_00917}; Short=CDG synthase {ECO:0000256|HAMAP-Rule:MF_00917};; EC=4.3.99.3 {ECO:0000256|HAMAP-Rule:MF_00917};; Queuosine biosynthesis protein QueE {ECO:0000256|HAMAP-Rule:MF_00917}; TaxID=1492281 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium Q-1.;"
7-carboxy-7-deazaguanine synthase n=1 Tax=Acidiphilium sp. PM RepID=F7S5Z3_9PROT
hypothetical protein
SCNpilot_cont_1000_p_scaffold_2681_curated_17
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12340..13029)
DNA (690bp) protein (230aa)
7-cyano-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00195886}; EC=6.3.4.20 {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00029421};; 7-cyano-7-carbaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633}; PreQ(0) synthase {ECO:0000256|HAMAP-Rule:MF_01633}; Queuosine biosynthesis protein QueC {ECO:0000256|HAMAP-Rule:MF_01633}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium den
7-cyano-7-deazaguanine synthase n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IG26_METNO
exsB protein; K06920 queuosine biosynthesis protein QueC
SCNpilot_cont_1000_p_scaffold_2681_curated_18
unknown

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comp(13100..13246)
DNA (147bp) protein (49aa)

This feature has no annotations

Displaying 18 items

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