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SCNpilot_cont_1000_p_scaffold_3984_curated

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_3984_curated_1
GWC2_Pelobacteraceae_58_13_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1..288)
DNA (288bp) protein (96aa)
transketolase; K00615 transketolase [EC:2.2.1.1]
Transketolase central region id=4919087 bin=GWC2_Pelobacter_58_13 species=Desulfovibrio salexigens genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=GWC2_Pelobacteraceae_58_13_curated
SCNpilot_cont_1000_p_scaffold_3984_curated_2
GWC2_Pelobacteraceae_58_13_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(278..1201)
DNA (924bp) protein (308aa)
Transketolase domain protein id=4919088 bin=GWC2_Pelobacter_58_13 species=Desulfovibrio salexigens genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
transketolase
Tax=GWC2_Pelobacteraceae_58_13_curated
SCNpilot_cont_1000_p_scaffold_3984_curated_3
R_OP11_Gottesmanbacteria_42_22, Gottesmanbacteria, Microgenomates, Bacteria

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comp(1224..2417)
DNA (1194bp) protein (398aa)
Type 11 methyltransferase n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EJV2_9RHOB
Tax=RIFCSPLOWO2_01_FULL_OP11_Gottesmanbacteria_42_22_curated
SCNpilot_cont_1000_p_scaffold_3984_curated_4
R_OP11_Gottesmanbacteria_42_22, Gottesmanbacteria, Microgenomates, Bacteria

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comp(2484..3308)
DNA (825bp) protein (275aa)
Tax=RIFCSPLOWO2_01_FULL_OP11_Gottesmanbacteria_42_22_curated
SCNpilot_cont_1000_p_scaffold_3984_curated_5
RLO_WOR_2_51_8, WOR-2, Bacteria

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comp(3305..4261)
DNA (957bp) protein (319aa)
3-demethylubiquinone-9 3-methyltransferase n=1 Tax=sediment metagenome RepID=D9PGB3_9ZZZZ
type 12 methyltransferase
Tax=RIFCSPLOWO2_12_FULL_WOR_2_51_8_curated
SCNpilot_cont_1000_p_scaffold_3984_curated_6
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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4342..5211
DNA (870bp) protein (290aa)
N-acetylneuraminate synthase (EC:2.5.1.56); K01654 N-acetylneuraminate synthase [EC:2.5.1.56]
N-acetylneuraminate synthase family protein n=2 Tax=Geobacter metallireducens RepID=Q39YH6_GEOMG
N-acetylneuraminate synthase family protein {ECO:0000313|EMBL:ABB30698.1}; TaxID=269799 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
SCNpilot_cont_1000_p_scaffold_3984_curated_7
unknown

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comp(5520..6167)
DNA (648bp) protein (216aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_3984_curated_8
Pelobacter carbinolicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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6291..7034
DNA (744bp) protein (248aa)
Acylneuraminate cytidylyltransferase id=4919094 bin=GWC2_Pelobacter_58_13 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
polysaccharide biosynthesis protein, glycosyltransferase
Glycosyltransferase {ECO:0000313|EMBL:ABA88385.1}; TaxID=338963 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;" source="Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1).;"
SCNpilot_cont_1000_p_scaffold_3984_curated_9
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7031..8524)
DNA (1494bp) protein (498aa)
TPR repeat-containing protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P0J9_AZOS1
TPR repeat-containing protein
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
SCNpilot_cont_1000_p_scaffold_3984_curated_10
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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8622..9878
DNA (1257bp) protein (419aa)
Regulatory protein FlaEY n=1 Tax=Caulobacter sp. (strain K31) RepID=B0SZT6_CAUSK
regulatory protein FlaEY
Uncharacterized protein {ECO:0000313|EMBL:ENZ83757.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
Displaying 10 items

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