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SCNpilot_cont_1000_p_scaffold_3655_curated

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_3655_curated_1
unknown

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comp(1..153)
DNA (153bp) protein (51aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_3655_curated_2
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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197..808
DNA (612bp) protein (204aa)
Putative Uracil-DNA glycosylase n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AVF7_AZOBR
putative Uracil-DNA glycosylase
Putative Uracil-DNA glycosylase {ECO:0000313|EMBL:CCD01916.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
SCNpilot_cont_1000_p_scaffold_3655_curated_3
Loktanella cinnabarina, Loktanella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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868..1605
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Loktanella cinnabarina LL-001 RepID=U2YLL5_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:GAD55991.1}; TaxID=1337093 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Loktanella.;" source="Loktanella cinnabarina LL-001.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_3655_curated_4
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1750..3189
DNA (1440bp) protein (480aa)
Putative replicative DNA helicase, dnaB {ECO:0000313|EMBL:CDX24094.1}; EC=3.6.1.- {ECO:0000313|EMBL:CDX24094.1};; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
DnaB helicase; K02314 replicative DNA helicase [EC:3.6.4.12]
DNA helicase n=1 Tax=Methylocystis parvus RepID=UPI0002D3B325
SCNpilot_cont_1000_p_scaffold_3655_curated_5
Rhodobacteraceae bacterium HTCC2150, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3186..3968)
DNA (783bp) protein (261aa)
Glycosyl transferase, family 25 n=1 Tax=Rhodobacteraceae bacterium HTCC2150 RepID=A3JVG0_9RHOB
Glycosyl transferase, family 25 {ECO:0000313|EMBL:EBA02342.1}; TaxID=388401 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae bacterium HTCC2150.;"
glycosyl transferase family protein; K07270 glycosyl transferase, family 25
SCNpilot_cont_1000_p_scaffold_3655_curated_6
unknown

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4095..4799
DNA (705bp) protein (235aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_3655_curated_7
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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4813..5910
DNA (1098bp) protein (366aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU000608}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU000608};; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
alanine racemase (EC:5.1.1.1); K01775 alanine racemase [EC:5.1.1.1]
Alanine racemase n=1 Tax=Oceanibaculum indicum P24 RepID=K2JRW6_9PROT
SCNpilot_cont_1000_p_scaffold_3655_curated_8
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

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5907..6680
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HYU9_PARL1
Probable ABC transporter permease protein {ECO:0000313|EMBL:CDO60862.1}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
hypothetical protein; K02066 putative ABC transport system permease protein
SCNpilot_cont_1000_p_scaffold_3655_curated_9
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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6677..7444
DNA (768bp) protein (256aa)
ABC transporter, ribonucleotide transport ATP-binding protein n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y496_9PROT
ABC transporter, ribonucleotide transport ATP-binding protein {ECO:0000313|EMBL:EGX99668.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;"
ABC transporter-like protein; K02065 putative ABC transport system ATP-binding protein
SCNpilot_cont_1000_p_scaffold_3655_curated_10
Shewanella oneidensis, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7446..7835
DNA (390bp) protein (130aa)
Glutathione-dependent formaldehyde-activating enzyme GfaB {ECO:0000313|EMBL:AAN53168.2}; EC=4.4.1.22 {ECO:0000313|EMBL:AAN53168.2};; TaxID=211586 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella oneidensis (strain MR-1).;"
Glutathione-dependent formaldehyde-activating enzyme GfaB n=1 Tax=Shewanella oneidensis (strain MR-1) RepID=Q8EKL1_SHEON
glutathione-dependent formaldehyde-activating protein
SCNpilot_cont_1000_p_scaffold_3655_curated_11
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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7856..9271
DNA (1416bp) protein (472aa)
DNA repair protein RadA (EC:2.1.1.63); K04485 DNA repair protein RadA/Sms
DNA repair protein radA n=1 Tax=Rhodovulum sp. PH10 RepID=J9DED8_9RHOB
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
SCNpilot_cont_1000_p_scaffold_3655_curated_12
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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9268..9987
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2K5Q0_9PROT
Colicin V production protein {ECO:0000313|EMBL:EWY39998.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
hypothetical protein; K03558 membrane protein required for colicin V production
SCNpilot_cont_1000_p_scaffold_3655_curated_13
Pseudovibrio sp. JE062, Pseudovibrio, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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9984..10709
DNA (726bp) protein (242aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; TaxID=439495 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Pseudovibrio.;" source="Pseudovi
amidophosphoribosyltransferase; K00764 amidophosphoribosyltransferase [EC:2.4.2.14]
Amidophosphoribosyltransferase n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R7Q8_9RHOB
Displaying 13 items

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