ggKbase home page

SCNpilot_cont_1000_p_scaffold_3743_curated

Search features with annotation key words

Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_3743_curated_1
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

77..862
DNA (786bp) protein (262aa)
Putative hydratase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TT29_9PROT
Putative hydratase {ECO:0000313|EMBL:EDP64003.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
hydratase/decarboxylase
SCNpilot_cont_1000_p_scaffold_3743_curated_2
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(855..2450)
DNA (1596bp) protein (532aa)
alpha amylase catalytic subunit; K01187 alpha-glucosidase [EC:3.2.1.20]
Alpha amylase, catalytic domain containing protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WUS1_9SPHN
Putative alpha-glucosidase {ECO:0000313|EMBL:GAL99671.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
SCNpilot_cont_1000_p_scaffold_3743_curated_3
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2588..5008
DNA (2421bp) protein (807aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
glgP; glycogen phosphorylase; K00688 starch phosphorylase [EC:2.4.1.1]
Phosphorylase n=1 Tax=Sphingomonas sp. S17 RepID=F3WZC8_9SPHN
SCNpilot_cont_1000_p_scaffold_3743_curated_4
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5005..7158
DNA (2154bp) protein (718aa)
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMAP-Rule:MF_00685}; Alpha-(1->4)-glucan branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; Glycogen branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
glgB; 1,4-alpha-glucan branching protein; K00700 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
1,4-alpha-glucan branching enzyme GlgB n=1 Tax=Sphingomonas sp. S17 RepID=F3WZC9_9SPHN
SCNpilot_cont_1000_p_scaffold_3743_curated_5
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7188..8447
DNA (1260bp) protein (420aa)
Glucose-1-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565}; EC=2.7.7.27 {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565};; ADP-glucose pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00624}; ADP-glucose synthase {ECO:0000256|HAMAP-Rule:MF_00624}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
glgC; glucose-1-phosphate adenylyltransferase (EC:2.7.7.27); K00975 glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] rbh
Glucose-1-phosphate adenylyltransferase n=1 Tax=Sphingomonas sp. S17 RepID=F3WZD0_9SPHN
SCNpilot_cont_1000_p_scaffold_3743_curated_6
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8466..10442
DNA (1977bp) protein (659aa)
glycogen/starch synthases, ADP-glucose type (EC:2.4.1.21); K00703 starch synthase [EC:2.4.1.21]
Glycogen synthase {ECO:0000255|HAMAP-Rule:MF_00484}; EC=2.4.1.21 {ECO:0000255|HAMAP-Rule:MF_00484};; Starch [bacterial glycogen] synthase {ECO:0000255|HAMAP-Rule:MF_00484}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
Glycogen synthase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=GLGA_NOVAD rbh
Displaying 6 items

View Taxonomy