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SCNpilot_cont_1000_p_scaffold_7884_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_7884_curated_1
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..273)
DNA (273bp) protein (91aa)
OmpA/MotB domain protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V4K4_SPHWW
Flagellar motor protein MotB {ECO:0000313|EMBL:KKC26627.1}; Flags: Fragment;; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
OmpA/MotB domain-containing protein
SCNpilot_cont_1000_p_scaffold_7884_curated_2
unknown

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347..616
DNA (270bp) protein (90aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_7884_curated_3
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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637..1086
DNA (450bp) protein (150aa)
Response regulator receiver protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HP55_PARL1
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ABS61688.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCNpilot_cont_1000_p_scaffold_7884_curated_4
Burkholderia sacchari, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1200..2714
DNA (1515bp) protein (505aa)
Radical SAM domain protein n=1 Tax=Burkholderia sp. H160 RepID=B5WK90_9BURK
Cobalamin-binding protein {ECO:0000313|EMBL:KHD22964.1}; TaxID=159450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sacchari.;"
cobalamin(vitamin B12) binding protein
SCNpilot_cont_1000_p_scaffold_7884_curated_5
Brevundimonas subvibrioides, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2734..3459)
DNA (726bp) protein (242aa)
Major facilitator superfamily MFS_1 n=1 Tax=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) RepID=D9QEZ0_BRESC
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ADL00475.1}; TaxID=633149 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903; / NBRC 16000 / CB 81) (Caulobacter subvibrioides).;"
SCNpilot_cont_1000_p_scaffold_7884_curated_6
Brevundimonas subvibrioides, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3459..4019)
DNA (561bp) protein (187aa)
Major facilitator superfamily MFS_1 n=1 Tax=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) RepID=D9QEZ0_BRESC
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ADL00475.1}; TaxID=633149 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903; / NBRC 16000 / CB 81) (Caulobacter subvibrioides).;"
SCNpilot_cont_1000_p_scaffold_7884_curated_7
unknown

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4714..4980
DNA (267bp) protein (89aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_7884_curated_8
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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4970..5719
DNA (750bp) protein (250aa)
Transcriptional regulatory protein ChvI n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TMA9_TISMK
chvI; transcriptional regulatory protein ChvI
Transcriptional regulatory protein ChvI {ECO:0000313|EMBL:AFK53897.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
SCNpilot_cont_1000_p_scaffold_7884_curated_9
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

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5703..7205
DNA (1503bp) protein (501aa)
Signal transduction histidine kinase n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AQA7_AZOBR
signal transduction histidine kinase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
SCNpilot_cont_1000_p_scaffold_7884_curated_10
Brevundimonas subvibrioides, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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7321..7929
DNA (609bp) protein (203aa)
Polysaccharide export protein n=1 Tax=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) RepID=D9QP19_BRESC
polysaccharide export protein; K01991 polysaccharide export outer membrane protein
Polysaccharide export protein {ECO:0000313|EMBL:ADL00452.1}; Flags: Precursor;; TaxID=633149 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903; / NBRC 16000 / CB 81) (Caulobacter subvibrioides).;"
SCNpilot_cont_1000_p_scaffold_7884_curated_11
Brevundimonas sp. BAL3, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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7938..9125
DNA (1188bp) protein (396aa)
Capsular exopolysaccharide family protein n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WEW4_9CAUL
Capsular exopolysaccharide family protein {ECO:0000313|EMBL:EDX82015.1}; TaxID=391600 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas sp. BAL3.;"
lipopolysaccharide biosynthesis protein
Displaying 11 items

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