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SCNpilot_cont_1000_p_scaffold_1882_curated_12

Organism: scnpilot_dereplicated_Alphaproteobacteria_2

partial RP 38 / 55 BSCG 39 / 51 MC: 1 ASCG 10 / 38
Location: 8191..8718

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimP n=1 Tax=Parvularcula bermudensis (strain ATCC BAA-594 / HTCC2503 / KCTC 12087) RepID=E0TEQ0_PARBH similarity UNIREF
DB: UNIREF100
  • Identity: 51.4
  • Coverage: 179.0
  • Bit_score: 161
  • Evalue 5.80e-37
hypothetical protein; K09748 ribosome maturation factor RimP similarity KEGG
DB: KEGG
  • Identity: 51.4
  • Coverage: 179.0
  • Bit_score: 161
  • Evalue 1.80e-37
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=314260 species="Bacteria; Proteobacteria; Alphaproteobacteria; Parvularculales; Parvularculaceae; Parvularcula.;" source="Parvularcula bermudensis (strain ATCC BAA-594 / HTCC2503 / KCTC; 12087).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.4
  • Coverage: 179.0
  • Bit_score: 161
  • Evalue 8.10e-37

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Taxonomy

Parvularcula bermudensis → Parvularcula → Parvularculales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 528
GTGACCATCACGGCCGCCGGCCATCTGGAACCGCTGTTCGAGCCCGTCATCGAAAAGGCGGGCTTCAAACTCGTGCGCCTGCGCATGATGGGCGGCGCCAGCCGCACGCTGCAGGTAATGGCCGAGCGTCCCGACGGCACCATGGATGTGGAAGGCTGCGCCGAACTCAGCCGCGCCCTTCTGGATTTCATCGAACAGGAAGACCCGATCGAGGGCGAATACGAGATCGAGGTTTCCTCGCCCGGCATCGACCGGCCGCTGACCAGGCTGGTGGATTTCGCCCGCTGGTCCGGCCATGAGGCCAAGATCGAACTCTTTGCCCCTGTCGCCACACCCTTCGGCGAAAGAAAACGCTTCCGCGCCCTCCTGATGGGCACCAACGGGCAGGACGTACTCATCCGTTCCGACAACGCCGACATCCGGTTTCCATTCCGTGCCATCGCAAACGCCAAGCTTGTTCTGACCGACAAGCTCATCAACGAAGATCTGAAGGCCCGAAAGAGGGCTACCACTCCAGGAGAAGACTGA
PROTEIN sequence
Length: 176
VTITAAGHLEPLFEPVIEKAGFKLVRLRMMGGASRTLQVMAERPDGTMDVEGCAELSRALLDFIEQEDPIEGEYEIEVSSPGIDRPLTRLVDFARWSGHEAKIELFAPVATPFGERKRFRALLMGTNGQDVLIRSDNADIRFPFRAIANAKLVLTDKLINEDLKARKRATTPGED*