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SCNpilot_cont_1000_p_scaffold_2196_curated_1

Organism: scnpilot_dereplicated_Alphaproteobacteria_2

partial RP 38 / 55 BSCG 39 / 51 MC: 1 ASCG 10 / 38
Location: 1..564

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L3 n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3HZS4_RHOVT similarity UNIREF
DB: UNIREF100
  • Identity: 67.4
  • Coverage: 181.0
  • Bit_score: 258
  • Evalue 4.90e-66
50S ribosomal protein L3; K02906 large subunit ribosomal protein L3 similarity KEGG
DB: KEGG
  • Identity: 67.4
  • Coverage: 181.0
  • Bit_score: 258
  • Evalue 1.50e-66
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=648757 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Rhodomicrobium.;" source="Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 /; LMG 4299).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.4
  • Coverage: 181.0
  • Bit_score: 258
  • Evalue 6.80e-66

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Taxonomy

Rhodomicrobium vannielii → Rhodomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 564
GGCTCGGGCTTTGCAAAGGCCAAGAATGCGACCCGCGCCGAACGCGGCCATTTCGCCAAGGCCGAGATCGAGCCCCGCCGCAAGGTGGCAGAGTTTCGTGTCGATCCGAAGAACATGCTGGAAGTCGGCGATCAGCTTCAGGCGGACCACTTCGTGCCCGGCCAGAAGGTGGATGTCACCGGCGTGACCATCGGTCGTGGTTTCACCGGCGCGATGAAGCGCTGGAATTTTCGCGGTCTGGAAGCCAGCCACGGCGTGTCAATCAGCCACCGCTCTCTCGGTGGTACCGGCGGCCGCCAGGACCCCGGCAAGACATTCAAGAACAAGAAGATGCACGGTCACTACGGCGTCGACAACATCACCACCCAGAACCTGGAAGTGGCCAAGGTCGATGTCGAGCGCGGCCTGATCATGGTGCGCGGCGCGGTGCCGGGCTCCAAGGGCGGCTGGGTGATGGTGCGCGATGCCGTCAAGCGGCCGGCCAAAGACGCGCCGTCTCCCGCTTCTGTCAAGAAGCGTGAAAAGACAACTGCACCGGCCGTCGAAGAAAAGTCCGAGGGCTAA
PROTEIN sequence
Length: 188
GSGFAKAKNATRAERGHFAKAEIEPRRKVAEFRVDPKNMLEVGDQLQADHFVPGQKVDVTGVTIGRGFTGAMKRWNFRGLEASHGVSISHRSLGGTGGRQDPGKTFKNKKMHGHYGVDNITTQNLEVAKVDVERGLIMVRGAVPGSKGGWVMVRDAVKRPAKDAPSPASVKKREKTTAPAVEEKSEG*