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SCNpilot_cont_1000_p_scaffold_2196_curated_16

Organism: scnpilot_dereplicated_Alphaproteobacteria_2

partial RP 38 / 55 BSCG 39 / 51 MC: 1 ASCG 10 / 38
Location: 6845..7378

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L6 n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3HZT9_RHOVT similarity UNIREF
DB: UNIREF100
  • Identity: 68.9
  • Coverage: 177.0
  • Bit_score: 250
  • Evalue 1.60e-63
50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 similarity KEGG
DB: KEGG
  • Identity: 68.9
  • Coverage: 177.0
  • Bit_score: 250
  • Evalue 5.10e-64
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=858455 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Rhodomicrobium.;" source="Rhodomicrobium udaipurense JA643.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.9
  • Coverage: 177.0
  • Bit_score: 250
  • Evalue 2.30e-63

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Taxonomy

Rhodomicrobium udaipurense → Rhodomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 534
ATGTCCCGTATTGGCAAGAAGCCGGTAGCACTGCCCAAGGGCGTCACCGCCTCCATCGACGGCCAGACCGTGAAGGTCAAGGGCCCGAAGGGCGAGCTGTCCGTGAAGCTGGTTCCCGAAGTCTCGGTGTCGGTGGGTGACACCGGCATCAGCGTGGCGCCGCGCAAGGAAATGGAGCGTGCGCCGCAGATGTGGGGCCTGTCGCGCACCCTGGTGAACAACCTGGTCACGGGGGTGACCACCGGCTTCTCGCAGAAGCTGGAGATACAGGGTGTCGGCTACCGCGCCGCGGTCCAGGGAAAGACTCTGAACCTGCAGCTCGGCTTCAGCCACGATGTGCCCTATGCGATCCCGGAAGGCATCACCATCACCACCGAAAAGCCGACTCTGATCACCGTTTCGGGCATTGACAAGCAGCTGGTGGGCCAGGTCGCCGCGGAGATCCGCGGCTGGCGTCCGCCGGAGCCCTACAAGGGCAAGGGCGTCCGCTACGAAGGCGAGTATGTCCGCCGCAAGGAAGGCAAGAAGAAGTAA
PROTEIN sequence
Length: 178
MSRIGKKPVALPKGVTASIDGQTVKVKGPKGELSVKLVPEVSVSVGDTGISVAPRKEMERAPQMWGLSRTLVNNLVTGVTTGFSQKLEIQGVGYRAAVQGKTLNLQLGFSHDVPYAIPEGITITTEKPTLITVSGIDKQLVGQVAAEIRGWRPPEPYKGKGVRYEGEYVRRKEGKKK*