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SCNpilot_cont_1000_p_scaffold_2196_curated_18

Organism: scnpilot_dereplicated_Alphaproteobacteria_2

partial RP 38 / 55 BSCG 39 / 51 MC: 1 ASCG 10 / 38
Location: 7789..8388

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S5 n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=RS5_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 79.7
  • Coverage: 182.0
  • Bit_score: 287
  • Evalue 1.40e-74
30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 similarity KEGG
DB: KEGG
  • Identity: 79.7
  • Coverage: 182.0
  • Bit_score: 287
  • Evalue 4.30e-75
30S ribosomal protein S5 {ECO:0000255|HAMAP-Rule:MF_01307}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.7
  • Coverage: 182.0
  • Bit_score: 287
  • Evalue 1.90e-74

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Taxonomy

Parvibaculum lavamentivorans → Parvibaculum → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 600
ATGGCACGCGAAGGACAGCAGCGGGACTCCAAGGAAGGCGGACGTGAGCGCGGCCGCGGCCGGGGGCGCGACAGGGAAGAGCAGGGCAGCGACCTGATCGACAAGCTGGTGCACATCAATCGTGTCGCCAAGGTCGTGAAGGGTGGCCGCCGCTTCGGCTTCGCTGCGCTGGTCGTGGTGGGCGACGGCAATGGCCGCGTCGGCTTTGGCCATGGCAAGGCGCGTGAAGTGCCTGAAGCCATCCGCAAGGCGACGGACGACGCCAAAAAGGCCATGATCCGCGTGCCCCTGAAGGACGGCCGCACCCTGCACCATGAAGTGCGTGGCCACCATGGCGCGGGCAAGGTGGTGGTGCGTCCGGCTCCGGCCGGTACAGGCATCATCGCCGGCGGCCCGATGCGTGCGGTGTTCGAAGCGCTGGGCGTGGGTGATGTTGTGTCCAAATCGCTGGGCACCTCCAACCCCTACAACATGGTGCGCGCCACGTTCGATGCGCTGACGAACCAGCAGAGCCCGCGCATGGTCGCCCAGCGCCGCGGCCGCAGCGTGTCGGAAATCCTGGCCCGCCGCGAAGACGCGCCCGCCGAAGCCAGCGCGTAA
PROTEIN sequence
Length: 200
MAREGQQRDSKEGGRERGRGRGRDREEQGSDLIDKLVHINRVAKVVKGGRRFGFAALVVVGDGNGRVGFGHGKAREVPEAIRKATDDAKKAMIRVPLKDGRTLHHEVRGHHGAGKVVVRPAPAGTGIIAGGPMRAVFEALGVGDVVSKSLGTSNPYNMVRATFDALTNQQSPRMVAQRRGRSVSEILARREDAPAEASA*