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SCNpilot_cont_1000_p_scaffold_1665_curated_8

Organism: scnpilot_dereplicated_Alphaproteobacteria_2

partial RP 38 / 55 BSCG 39 / 51 MC: 1 ASCG 10 / 38
Location: comp(7847..8758)

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide biosynthesis n=1 Tax=Shewanella sp. HN-41 RepID=F7RQS0_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 25.0
  • Coverage: 308.0
  • Bit_score: 87
  • Evalue 1.80e-14
Lipopolysaccharide biosynthesis {ECO:0000313|EMBL:EGM69254.1}; TaxID=327275 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella sp. HN-41.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 25.0
  • Coverage: 308.0
  • Bit_score: 87
  • Evalue 2.60e-14
lipopolysaccharide biosynthesis protein similarity KEGG
DB: KEGG
  • Identity: 25.0
  • Coverage: 304.0
  • Bit_score: 82
  • Evalue 2.40e-13

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Taxonomy

Shewanella sp. HN-41 → Shewanella → Alteromonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 912
GTGACCACGAGGGAGCTTGATATCGGGGCGATCGTCTCCGATATCCGGAAGAAGCTGTTCCTCTTCCTGACCGTCACCGGCAGTGTCTTCGTCCTGACGGCTGTGCTGCTGCATTTCAGTGCGCCGAAATATACCGTAACCATGGTCGTAGGTCCGATCACCGACAGCAGCAACCAGGCCGGCGGCAGCCTGGGTGCACTGGCCCGGCTTGGCGGCGTCAATTTGGCCGGTCTCAATAATTCAGCGGGGCAATTCCGGCTGTTCATCAGTGCACTGACGACGCGCGACACCGCCGATGGGTTGGCACGCGACCAGAACCTGATGCATCGCCTTTTCGACAACCAATGGTCGATCGAGAAGCAGCGTTGGAAGGGACCGGGTCTAATCAGCCGCGCAATCCGCACCGTCAAGTTCATGCTGGGTATTCCGGTGGAGCCCTGGCACCCGCCGAATGGTGAGCAGGTGTATGAACTGCTGAGCAGCAGCCTGCAGATCGACGATGATCCGCAGGCGCCGGTTGTCGCCCTGCGAATCCAAAGCTCAGATCCCAATACCGCAAGGCTGTTCCTGCTCAAGCTCGCAGACGTGGTGGACAGCACTTTGCGCGCCCGGGCGCTGGCGCGTGCCGACGGCTATATCCAGTATCTCAATGCGCAGATCGGAAAGACTACCGTGGCCGAATACCGCGCTGCGCTGACGGCCCATCTTGCTGAGCAGGAGCAGACCCGCATGATGGCGAGCGCCCACAGCGTATCCTTCGCTGCTCAGATATTCAGTGCGCCCGCGCGTTCGGCGCAACCCACCGCGCCCAAGAGCACCATGCTGCTTTTTTTGGCACTGGTGTTTGGCGCGCTACTGGGCGGCTGGCTGGCGGTGCGCGCGGCTCGGCGAGAGCGGGCAGCCGGGTACTGA
PROTEIN sequence
Length: 304
VTTRELDIGAIVSDIRKKLFLFLTVTGSVFVLTAVLLHFSAPKYTVTMVVGPITDSSNQAGGSLGALARLGGVNLAGLNNSAGQFRLFISALTTRDTADGLARDQNLMHRLFDNQWSIEKQRWKGPGLISRAIRTVKFMLGIPVEPWHPPNGEQVYELLSSSLQIDDDPQAPVVALRIQSSDPNTARLFLLKLADVVDSTLRARALARADGYIQYLNAQIGKTTVAEYRAALTAHLAEQEQTRMMASAHSVSFAAQIFSAPARSAQPTAPKSTMLLFLALVFGALLGGWLAVRAARRERAAGY*