ggKbase home page

SCNpilot_cont_1000_p_scaffold_5954_curated_4

Organism: scnpilot_dereplicated_Alphaproteobacteria_2

partial RP 38 / 55 BSCG 39 / 51 MC: 1 ASCG 10 / 38
Location: 4285..5145

Top 3 Functional Annotations

Value Algorithm Source
Outer membrane protein assembly factor BamD n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TVQ4_TISMK similarity UNIREF
DB: UNIREF100
  • Identity: 59.3
  • Coverage: 275.0
  • Bit_score: 332
  • Evalue 3.10e-88
DNA uptake lipoprotein similarity KEGG
DB: KEGG
  • Identity: 59.3
  • Coverage: 275.0
  • Bit_score: 332
  • Evalue 9.70e-89
Outer membrane protein assembly factor BamD {ECO:0000256|HAMAP-Rule:MF_00922}; Flags: Precursor;; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.3
  • Coverage: 275.0
  • Bit_score: 332
  • Evalue 4.30e-88

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Tistrella mobilis → Tistrella → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 861
ATGCCGATTTCCGTCTCCCTCAAGCCTTTTGCGCGCCTGGCCCTTGTGGGCGCCGTTCTGGCCGCGCTGGCCGGCTGCGGCCTGTTCGAGAAGAACGACGCCTCCAACAATGCCAACAAGGACGCCGCCCAGTATCGCGAGCGCCCGATCGAGCAGATCTATGCCGATGCCTGGCGCGCCATCAATGTGGGCAACTGGGAACAGGCCGCCGCCCAGTTCAACGAGGTCGACCGCCAGCATCCCTATTCGGTGTGGGCGCGCCGGGCCATGCTGATGAGCGCCTTCTGCTCCTACCAGGCCAACAAATATTCCGACGCCATCTCGACGGCCGACAACTATATCCAGCTGCATCCGGGCAGTCCGGAAGTGGCCTATGCCTTCTACCTCAAGGCTGTGTCGCTCTATGAGCAGATCGTCGACGTCAACCGCGACCAGTCCAATACCCAGGGCGCGCTGGTGGCGCTGCAGGACGTGGTCCAGCGCTTCCCCGATACCGAATATGCCCGCGACGCCACGCTGAAGATCGACCTGACCATGGACCATCTGGCAGGCAAGGAAATGCAGGTGGGCCGCTATTACCTCAATCGCGGCGACTATATCGGCGCCATCAACCGCTTCCGCACCGTGGTCGAGCAGTATGCCACCACCCCCCAGATCGCCGAGGCGCTGGAACGGCTGACCGAGGCCTATTTCAGCCTGGGCCTGGACCGCGAGGCCCAGACCGCCGCGGCCGTGCTGGGCGCCAATTATCCCGGGTCGGCCTGGTACCAGGATGCCTACAACATCCTGAAGGGGCGCAATCTCAAGCCGGTGGAAGACAAGGGCTCCTGGATCAGTCAGGCTTTCCGCAAAGTCCTCTGA
PROTEIN sequence
Length: 287
MPISVSLKPFARLALVGAVLAALAGCGLFEKNDASNNANKDAAQYRERPIEQIYADAWRAINVGNWEQAAAQFNEVDRQHPYSVWARRAMLMSAFCSYQANKYSDAISTADNYIQLHPGSPEVAYAFYLKAVSLYEQIVDVNRDQSNTQGALVALQDVVQRFPDTEYARDATLKIDLTMDHLAGKEMQVGRYYLNRGDYIGAINRFRTVVEQYATTPQIAEALERLTEAYFSLGLDREAQTAAAVLGANYPGSAWYQDAYNILKGRNLKPVEDKGSWISQAFRKVL*