ggKbase home page

SCNpilot_cont_1000_p_scaffold_5954_curated_6

Organism: scnpilot_dereplicated_Alphaproteobacteria_2

partial RP 38 / 55 BSCG 39 / 51 MC: 1 ASCG 10 / 38
Location: 6782..8941

Top 3 Functional Annotations

Value Algorithm Source
NAD-dependent DNA ligase (EC:6.5.1.2); K01972 DNA ligase (NAD+) [EC:6.5.1.2] similarity KEGG
DB: KEGG
  • Identity: 60.2
  • Coverage: 723.0
  • Bit_score: 837
  • Evalue 2.30e-240
DNA ligase {ECO:0000255|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000255|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000255|HAMAP-Rule:MF_01588}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.2
  • Coverage: 723.0
  • Bit_score: 837
  • Evalue 1.00e-239
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI000375C0ED similarity UNIREF
DB: UNIREF100
  • Identity: 63.3
  • Coverage: 725.0
  • Bit_score: 849
  • Evalue 2.50e-243

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Methylocella silvestris → Methylocella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2160
GTGAGCACCAAATCCGTCGATAAACTCACCTCCGCGGAAGCCGCAAAGGAACTGGACCGCCTGGCGCGCGAAATCGCCGAGCACGACCGGCATTATTACCTTCAGGACGCGCCGGTCATTTCCGACGCCGAATATGATGCCCTGCGCCGCCGCAATGCCGAGATCGAGGCGCGCTTTCCGCGCCTGATCCGGCCGGATTCCCCCTCGCACCGCATCGGCGCCAGGCCTTCGGAGAAATTCGCCAAGGTCCGGCATGCGGTCCCCATGCTGTCGCTCGACAATGCCTTCAGCGATGAGGATGTGGCCGACTTCATCGGCCGGGTGCGCCGCTTCCTGGGGCTGAAGGACGATGACGCGGTGGCGGTGATGGCCGAACCCAAGATCGACGGGCTGTCGGCCTCGCTTCGCTATGAGAACGGCATTTTCGTCCAGGGCGCCACCCGTGGCGACGGCGAGGAAGGCGAGGATATCACCGCCAACCTGCGCACCATCTCCGACATTCCGCTTCGTTTGTCGGGCAGGCCGCCCAAAGTCCTGGAAGTGCGCGGCGAGGTCTATATGACCCACAAGGCCTTCGCGGCGCTGAACAAAAGGCAGGAAAAGGAAGGCAAGCCCGTCTACGCCAATCCGCGCAATTCCGCCGCCGGCTCGGTACGCCAGCTCGATCCGAAAATCACCGCCGGCCGCGCGCTGAACTTCTTTGCCTATGCCTGGGGAGAAATCAGCGACATGCCCGCCGACACCCAGCACGGCATCCTGCAGAAATTCGAAAGCTACGGCTTCGTCGTCAATCCGCTGGTGCGCCGCTGCGAGACGCTGGAGCAGGTGCTTAAATTCTACCGCGATATCGAAGCCCGGCGGGCGAAGCTTGGCTATGACATCGACGGCGTGGTCTACAAGGTGGACCGGCTGGACCTTCAGGAGCGGCTTGGTTTGGTCTCGCGCTCGCCCCGCTGGGCCATCGCCCACAAGTTCCCCGCCGAGCAGGCCGAGACGGTGATCGAGGCGATCGAAATCCAGGTCGGCCGCACCGGCAAGCTGGCGCCGGTGGCAAGGCTCAAGCCCGTCACGGTGGGCGGCGTGGTGGTGCAGAACGCCACCTTGCACAACGAGGACGAGATCGCCCGTCTGGACGCGCGCGTCGGCGACACGGTGGTGATCCAGCGCGCCGGCGACGTGATCCCCCAGATACTGCGCGTGATCCTCGAAAAGCGGCCCAGGAACAGCAGGCCTTATCACTTCCCGCACAAATGTCCGGTCTGCGGCAGCCATGCGGTGCGCGAGGTGGACGAAAAGACCGGCAGGGAAGATGTCGATCGCCGCTGCACCGGCGGGCTGATCTGCGACGCCCAGACGGTGGAGCGGCTGAAATATTTCGTCGGCCGCGACCAGTTCGACATCGAAGGGCTTGGCGGCACGCTGATCGAGCTGTTCCACGAAAGGGGCCTGCTGAAGGAGCCCGCCGACATTTTCGCGCTGACGGAAAAGCCGAAAAAGGTTGCCGCCATCCTGGCCGAACATCGCGCCCGCCTGTCCGAGGAACGCCGTGCCGCTGAAGGCAAGGAGCCGGTGAAAACAAAGGGCAAAAAGAAAGCCGACGAGGGCGAAGGCAAGCAGGTCGAAAACCTGATGGCCGCCATAGAGCGCCGCCGCACCATCGGCCTGGACCGCTTCATCAACGCGCTGGGCATCCGCCATGTGGGCGAGACCACGGCGCGGCTGCTGGCGCGGCATTATCGCAGCCTGGGTGCGTTCCTGGCCGGCATGAAGGCCGGCAACGTAAAGGAAGAGCTGGAAAGCATCGAAGGCATCGGCGGCGTGGTCGCCGAGGCGATCTTCGATTTCTTCGACGAGCCGCACAATGTGAAGGCGCTGGACCGGTTGCTGAAATGGCTGACCGTGACCGACATGGCGGCACCGGCGAACTCCTCGCCCGTTTCCGGAAAGACCGTGGTCTTCACCGGCACACTGGAAAAAATGACCCGCCAGGAAGCCAAGGCGCGCGCGGAAAGCCTTGGCGCCAAGGTGTCCGGCTCGGTGTCGGCCAAGACCGACATCGTGGTGGCCGGGCCGGGCGCGGGCTCCAAGCTCAAGGAGGCCCAGAAGCACAATGTGCAGGTGCTGGACGAAGATGCCTGGCTGAAGCTGATTTCCGCCTAG
PROTEIN sequence
Length: 720
VSTKSVDKLTSAEAAKELDRLAREIAEHDRHYYLQDAPVISDAEYDALRRRNAEIEARFPRLIRPDSPSHRIGARPSEKFAKVRHAVPMLSLDNAFSDEDVADFIGRVRRFLGLKDDDAVAVMAEPKIDGLSASLRYENGIFVQGATRGDGEEGEDITANLRTISDIPLRLSGRPPKVLEVRGEVYMTHKAFAALNKRQEKEGKPVYANPRNSAAGSVRQLDPKITAGRALNFFAYAWGEISDMPADTQHGILQKFESYGFVVNPLVRRCETLEQVLKFYRDIEARRAKLGYDIDGVVYKVDRLDLQERLGLVSRSPRWAIAHKFPAEQAETVIEAIEIQVGRTGKLAPVARLKPVTVGGVVVQNATLHNEDEIARLDARVGDTVVIQRAGDVIPQILRVILEKRPRNSRPYHFPHKCPVCGSHAVREVDEKTGREDVDRRCTGGLICDAQTVERLKYFVGRDQFDIEGLGGTLIELFHERGLLKEPADIFALTEKPKKVAAILAEHRARLSEERRAAEGKEPVKTKGKKKADEGEGKQVENLMAAIERRRTIGLDRFINALGIRHVGETTARLLARHYRSLGAFLAGMKAGNVKEELESIEGIGGVVAEAIFDFFDEPHNVKALDRLLKWLTVTDMAAPANSSPVSGKTVVFTGTLEKMTRQEAKARAESLGAKVSGSVSAKTDIVVAGPGAGSKLKEAQKHNVQVLDEDAWLKLISA*