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SCNpilot_cont_1000_p_scaffold_8162_curated_3

Organism: scnpilot_dereplicated_Alphaproteobacteria_2

partial RP 38 / 55 BSCG 39 / 51 MC: 1 ASCG 10 / 38
Location: comp(1669..3219)

Top 3 Functional Annotations

Value Algorithm Source
pilus assembly protein CpaC n=1 Tax=Caulobacter sp. JGI 0001013-O16 RepID=UPI00037EA25C similarity UNIREF
DB: UNIREF100
  • Identity: 46.8
  • Coverage: 479.0
  • Bit_score: 412
  • Evalue 5.50e-112
Type II/IV secretion system secretin RcpA/CpaC,associated with Flp pilus assembly {ECO:0000313|EMBL:CDO59910.1}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.2
  • Coverage: 514.0
  • Bit_score: 458
  • Evalue 9.50e-126
type II and III secretion system protein; K02280 pilus assembly protein CpaC similarity KEGG
DB: KEGG
  • Identity: 46.0
  • Coverage: 491.0
  • Bit_score: 409
  • Evalue 1.90e-111

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Taxonomy

Candidatus Phaeomarinobacter ectocarpi → Candidatus Phaeomarinobacter → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1551
GTGACAATCTCTGCGACCAGACACCCGGTGTTCTTTCTGCGCGGGTTCCTGTTTCTGGGCCTGCTGCTGGCAGCCGCGCCGGCGGCCGCCAAGCCGGAAATCGACGAAGCCAATGCGCGCCTTCTTTCCATCACCACCCACGGCGCTTCCGTCCACCAGCGCCTGACTCTTTCGCTCGACAAGGCCGCCATCGTGCAGCTGGATGCCGATGCGCGCGACGTTCTGGTGTCCAATCCCGACATGGTCGATGCGATCGTGCGCACGCCGCGCCGCATCTTCCTTTTGGCCAACAAGGTGGGCCAGACCAACGCCTTCTTCTTCGACGCCAACGGCAAGCAGATCCTGTCCCTGGACATCCGCGTCGAGCGCGACGTGACAGACCTGTCCACCCTGATGCATGCCTCCATGCCCAATTCCTCCATCAAGGTGCAGGCGCTGAACGACAATGTGGTGCTGACCGGCTCGGTCTCCAGCGCCATCGAGGCGTCCCATGCCGCGGACCTGGCGGCGCGCTTTGCCGGCGACCCCAAGAAAGTGGTCAACATGATCAGCGTGGCCGCCGGCCAGCAGGTGATGCTGAAGGTCCGCATCGCCGAGATGGACCGCAACATCGCCAAGCAGTTCGGCATCGACCTGACCGCCGCCGCCAAGATCGGCGGCGTGCCCATGGTGACCTCCACTTCCAATCCCTATGGCCTTCTGGGCCGCGCGCTGTCCGACATGTCCGGCAGCCAGATTGGTTCGGTCTGCCCTCAGGCGTTCACCCCCACCGTCACGACGAATATCGCCACCAGCGCCACCACCGGCTCGCCCGCCACGACCACGACCAGTACCAACACCTCCATCCCCTGCTCGAGCCCCAACAACGCCCAGGGCGTGCTGAAGGCGCTGGAGCAGGTGGGCCTGGTGCACATGCTGGCCGAACCCAACCTCACAGCCGTCAGCGGCGAAACCGCCAAGTTCCTCGCCGGCGGCGAATTTCCGGTCCCCGCCAGCCGCGACCGCGACGGCAACGTGACCGTGGTGTTCAAGCAGTTCGGCGTGGGCCTTTCCTTCACCCCGGTGGTGCTGTCGCCCGGCCGCATCTCCATCCAGCTGTCCAGCGAAGTGAGCGAACTGTCCAATACCGGCTCCTTCCTGCTGAATGGCTCCACCTCCGGCAATGGCCTGAGCATTCCGGCCCTGTCGGTGCGCCGCACCGAGACCACGATCGAGCTGCCCTCCGGCGGCAGCTTCGCGGTGGCCGGCCTGATGCAGCACAACACCAAGCAGGTGATCGACGGCTTTCCCGGCGTAAAGGATCTGCCGGTGCTGGGCGCGCTGTTCCGCAGCCGCGACTTCCAGAACGACGAAACCGAACTTGTGGTGCTGGTCAGCGCCTATCTGGTCGAGCCCACCGCCGAAGGCGCGCTGGCCGCGCCCACCGACGGCTTCGTGGCCCCGACCGATCCGGAAACCCTGCTGCTGGGCCGCCTGAACGCGGTCTACAGGAAGGACGCCAAGCCCGTAACGCCCCAGGCGGCCGCCCCCGTCGGCTTCGTGGTGCGATAG
PROTEIN sequence
Length: 517
VTISATRHPVFFLRGFLFLGLLLAAAPAAAKPEIDEANARLLSITTHGASVHQRLTLSLDKAAIVQLDADARDVLVSNPDMVDAIVRTPRRIFLLANKVGQTNAFFFDANGKQILSLDIRVERDVTDLSTLMHASMPNSSIKVQALNDNVVLTGSVSSAIEASHAADLAARFAGDPKKVVNMISVAAGQQVMLKVRIAEMDRNIAKQFGIDLTAAAKIGGVPMVTSTSNPYGLLGRALSDMSGSQIGSVCPQAFTPTVTTNIATSATTGSPATTTTSTNTSIPCSSPNNAQGVLKALEQVGLVHMLAEPNLTAVSGETAKFLAGGEFPVPASRDRDGNVTVVFKQFGVGLSFTPVVLSPGRISIQLSSEVSELSNTGSFLLNGSTSGNGLSIPALSVRRTETTIELPSGGSFAVAGLMQHNTKQVIDGFPGVKDLPVLGALFRSRDFQNDETELVVLVSAYLVEPTAEGALAAPTDGFVAPTDPETLLLGRLNAVYRKDAKPVTPQAAAPVGFVVR*