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SCNpilot_cont_1000_p_scaffold_3270_curated_12

Organism: scnpilot_dereplicated_Alphaproteobacteria_2

partial RP 38 / 55 BSCG 39 / 51 MC: 1 ASCG 10 / 38
Location: comp(7933..8217)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, ArsR family n=1 Tax=Afipia sp. 1NLS2 RepID=D6V2G4_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 54.3
  • Coverage: 92.0
  • Bit_score: 100
  • Evalue 1.10e-18
Putative HTH-type transcriptional regulator YgaV {ECO:0000313|EMBL:CEG07392.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.3
  • Coverage: 92.0
  • Bit_score: 100
  • Evalue 1.60e-18
ArsR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 54.8
  • Coverage: 84.0
  • Bit_score: 98
  • Evalue 1.30e-18

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 285
TTGCCTGCGGGGAAAATTGCCGAGAGTGTCGGCGTGGCGCCGTCGACCTTTTCGTTTCATGTCGCCGCCCTGGAACGCGCCGGACTGGTGCGTTCGGAGCGCGCGCAGCGGCAGATTCTCTATTCCGCCAATCTCAATGGCGTGCGGGAGTTGCTCACCTTCCTGCTCGATGATTGCTGCGGCGGCCATCCGGAAATTTGCGCCAATCTTTTCCCCGACATCGCCGCAGAAGCGGCCTGCTGCACGCCCGCCAGGCCCAAATCCCGCAAGCGCAGCACGCGATAA
PROTEIN sequence
Length: 95
LPAGKIAESVGVAPSTFSFHVAALERAGLVRSERAQRQILYSANLNGVRELLTFLLDDCCGGHPEICANLFPDIAAEAACCTPARPKSRKRSTR*