ggKbase home page

SCNpilot_cont_1000_p_scaffold_1687_curated_24

Organism: scnpilot_dereplicated_Alphaproteobacteria_2

partial RP 38 / 55 BSCG 39 / 51 MC: 1 ASCG 10 / 38
Location: 24739..25023

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1123237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Salipiger.;" source="Salipiger mucosus DSM 16094.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.9
  • Coverage: 82.0
  • Bit_score: 99
  • Evalue 2.70e-18
transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] similarity KEGG
DB: KEGG
  • Identity: 48.5
  • Coverage: 99.0
  • Bit_score: 97
  • Evalue 3.00e-18
Transcription-repair-coupling factor n=1 Tax=Salipiger mucosus DSM 16094 RepID=S9RPS9_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 54.9
  • Coverage: 82.0
  • Bit_score: 99
  • Evalue 1.90e-18

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Salipiger mucosus → Salipiger → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 285
GTGGATCGGCTTGATTACATCGCCCGCCAGCCGGGCCGGCTGACGCTCACCGGCGCACCGCAGGGCTATGACGCCTATATCGCGGCGGAAGCCGCGCGCCGCCTTGGGCAACCGGTGCTGTTCGTGGCGCTGGACGATGCCGAGGCCGACGCGATCTGCCGCGCCATTTCATTCTTCGCGCCGGCGATGACGGTGCTGCCGTTCCCGGCCTGGGACTGCCTGCCTTACGACCGCGCCTCGCCCAAGCCGGACATCGAAAGCCGCCGGCTCGCGACGCTTTCCCAT
PROTEIN sequence
Length: 95
VDRLDYIARQPGRLTLTGAPQGYDAYIAAEAARRLGQPVLFVALDDAEADAICRAISFFAPAMTVLPFPAWDCLPYDRASPKPDIESRRLATLSH