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SCNpilot_cont_1000_p_scaffold_4588_curated_16

Organism: scnpilot_dereplicated_Alphaproteobacteria_2

partial RP 38 / 55 BSCG 39 / 51 MC: 1 ASCG 10 / 38
Location: comp(11306..12829)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-54 factor n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RCJ3_PHEZH similarity UNIREF
DB: UNIREF100
  • Identity: 60.7
  • Coverage: 506.0
  • Bit_score: 578
  • Evalue 5.70e-162
rpoN; RNA polymerase factor sigma-54; K03092 RNA polymerase sigma-54 factor similarity KEGG
DB: KEGG
  • Identity: 60.7
  • Coverage: 506.0
  • Bit_score: 578
  • Evalue 1.80e-162
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.7
  • Coverage: 506.0
  • Bit_score: 578
  • Evalue 8.00e-162

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Taxonomy

Phenylobacterium zucineum → Phenylobacterium → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1524
ATGGCGCTGGGACAGAGACTCGAGATACGGCAGGGCCAGTCGCTGGTCATGACGCCGCAATTGCAGCAGGCGATCAAGCTGCTGCAACTGTCCAATCTCGAGCTGGCCGAATATTGCGAGGCCGAGCTGGAGCGCAATCCGATCCTGGAGCGTGACGACCGCGAGGCCGCGCCCATCGCCGATGCCGATGGCCCGGTGCTCCAGTCCGCGCCCGGCGAGCGTGCGGACGAGGCTTTGTCGCGCGATGACTTCTCACGTGCCGCCGACATGGACCAGGCGGCGCATGACAACATGTATGACGGCGATCTGGCGTCGAAGGCGCCGGAGGCGCCGATGGGCGGCAACCTGACCGATTGGACCACCGTGCGCTCCGGCAACGCCTATGAGGGCGAGGATACGCTGGAATCGACGGTGTGCGCCGAAGCCTCGCTCAAGGACCATCTGGAAAGCCAGCTCTCCATCGCCGCGCTGCTGCCGGAAGACCGGATGATCTGCACGGCGCTGATCGATGCCGTGGACGAGGCGGGTTATCTGCGTGCCGACCTCAAGGAACTGGCGCTGCGGCTGGGTTGCGAGATCGAAGACGTGCAGGCGGTGCTGGGCGTGCTGCAGGGCTTCGATCCGGTCGGCGTGGGCGCGCGCGACCTGGCGGAGTGCCTGGCGCTGCAACTGAAGGCCCGCGACCGGCTCGACCCCGCGATGGAGGCCCTGCTCACCCGCCTCGATCTGGTCGCCCGCCGCGACATCGGTCCGCTGACCGCGCTGTGCGGCGTCGATGCCGAGGATGTCGCCGACATGATCGCCGAGATCCGCACCCTCAATCCCAAGCCGGGCCTGGCCTTCGGGTCGGAGCCGGTGACCCCGGTGGTGCCCGATGTCTTCGTGCGCGTCGGCCCCGACGGTGGCTGGCAGATCGAACTCAACTCCGACACCCTGCCGCGGCTTCTGGTCAACAACCGCTATTACAGCGCCGTGGCGAAGGATGCGCGCGACAAGGACGCCAGGACCTATCTGGCCGACTGCCTCAACAGCGCCAACTGGCTGGTCAAGAGCCTGGACCAGCGCGCCCGCACCATCCTGAAGGTCGCCACCGAGATCGTGCGCCACCAGGACGCTTTCCTCACCTATGGCGTGCGTCACCTTCGGCCGCTGAACCTGCGCATCATCGCCGACGCGATCCAGATGCACGAATCCACCGTCAGCCGCGTGACATCCAACAAGTATATTGCGACGCCGCGCGGCCTGTTCGAATTGAAATATTTCTTCACCGCCTCGATCCAGTCGATCGACGGGGCCGAATCACATTCCGCCGAAGCGGTGCGCGACCGCATCCGCGAGATGATCCAGAACGAGGCGCCGAAGGAGATTCTCTCCGACGACCGCATCGTCTCGCTGCTCACCGCCGACGGGGTGAACATTGCGCGCCGTACGGTGGCAAAATACCGGGAAGCCATGCGAATCCCGTCATCGGTGGAGCGGCGGCGGCAGAAATCCCCGGCCGGCTCCCAGGCTGCCTGCCGTTGA
PROTEIN sequence
Length: 508
MALGQRLEIRQGQSLVMTPQLQQAIKLLQLSNLELAEYCEAELERNPILERDDREAAPIADADGPVLQSAPGERADEALSRDDFSRAADMDQAAHDNMYDGDLASKAPEAPMGGNLTDWTTVRSGNAYEGEDTLESTVCAEASLKDHLESQLSIAALLPEDRMICTALIDAVDEAGYLRADLKELALRLGCEIEDVQAVLGVLQGFDPVGVGARDLAECLALQLKARDRLDPAMEALLTRLDLVARRDIGPLTALCGVDAEDVADMIAEIRTLNPKPGLAFGSEPVTPVVPDVFVRVGPDGGWQIELNSDTLPRLLVNNRYYSAVAKDARDKDARTYLADCLNSANWLVKSLDQRARTILKVATEIVRHQDAFLTYGVRHLRPLNLRIIADAIQMHESTVSRVTSNKYIATPRGLFELKYFFTASIQSIDGAESHSAEAVRDRIREMIQNEAPKEILSDDRIVSLLTADGVNIARRTVAKYREAMRIPSSVERRRQKSPAGSQAACR*