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SCNpilot_cont_1000_p_scaffold_5490_curated_9

Organism: scnpilot_dereplicated_Alphaproteobacteria_2

partial RP 38 / 55 BSCG 39 / 51 MC: 1 ASCG 10 / 38
Location: 5740..6378

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma70 n=1 Tax=Maricaulis sp. JL2009 RepID=UPI0003A61A0A similarity UNIREF
DB: UNIREF100
  • Identity: 55.0
  • Coverage: 202.0
  • Bit_score: 213
  • Evalue 2.00e-52
Sigma-70 region 2 {ECO:0000313|EMBL:EKY30748.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.4
  • Coverage: 204.0
  • Bit_score: 212
  • Evalue 6.30e-52
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 55.0
  • Coverage: 202.0
  • Bit_score: 208
  • Evalue 2.70e-51

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Taxonomy

Brevundimonas diminuta → Brevundimonas → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 639
ATGCCCACGCCGACCCCGTCCGCCATGTCGCCCAAGCCCGAAAACCCGGACTTCAAGGGAGAGCTTCTTGCCCTGGTGCCGTTCCTGCGCGCCTTCGCCCGCTCGCTGACCGGCAACCAGGAGGCCGCCGACGACCTGGCGCAGGAGACGCTGGTCAAGGCCTGGCAGAGCCGCGCCAGTTTCCAGCCCGGCACCAACCTGAAGGCGTGGCTGTTCACCATCCTGCGCAACCAGTTCTATTCCGACCGCCGCCGTGCCTGGCGGCAGGCGCCCTGGGACCAGGACGCGGCCGAGCGCATTCCCGGCGGCGGCGAGGACCAGGTCTATTCAGCCGAACTCTCCGATACCGTGCGCGCCCTCAAGCACCTGTCCGACGAGCAGCGCGAGGCCCTGATTCTGGTGGGCGCGGGCGGATTTTCCTATGAAGATGCGGCCGCCATCTGCAAATGCGCCGTGGGTACGGTCAAAAGCCGGGTTGCCCGGGCGCGCAAGACATTGATAGAGATTCTGGATGGCAGCGACACCTTGAATGACGTATCGCGCCCGGCCGGGGGAGAAGCGGCCCGTGAGATCATGGAGCAGCTGGATAAGCTCAGTCCTGGCCGGTCCGAAGAGCTCGCTAAGAAGCGCGTCAAATAA
PROTEIN sequence
Length: 213
MPTPTPSAMSPKPENPDFKGELLALVPFLRAFARSLTGNQEAADDLAQETLVKAWQSRASFQPGTNLKAWLFTILRNQFYSDRRRAWRQAPWDQDAAERIPGGGEDQVYSAELSDTVRALKHLSDEQREALILVGAGGFSYEDAAAICKCAVGTVKSRVARARKTLIEILDGSDTLNDVSRPAGGEAAREIMEQLDKLSPGRSEELAKKRVK*