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SCNpilot_cont_1000_p_scaffold_5490_curated

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_5490_curated_1
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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212..1312
DNA (1101bp) protein (367aa)
Dolichol-phosphate mannosyltransferase-like protein {ECO:0000313|EMBL:EGP06903.1}; EC=2.4.1.83 {ECO:0000313|EMBL:EGP06903.1};; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
dolichyl-phosphate beta-D-mannosyltransferase (EC:2.4.1.83); K00721 dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
dolichol monophosphate mannose synthase n=1 Tax=Afipia birgiae RepID=UPI000361F895
SCNpilot_cont_1000_p_scaffold_5490_curated_2
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1422..2924
DNA (1503bp) protein (501aa)
Glycosyl transferase, family 39 n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2ITV8_RHOP2
glycosyl transferase family protein
Glycosyl transferase, family 39 {ECO:0000313|EMBL:ABD08352.1}; Flags: Precursor;; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
SCNpilot_cont_1000_p_scaffold_5490_curated_3
unknown

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comp(3172..3327)
DNA (156bp) protein (52aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_5490_curated_4
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

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comp(3358..3531)
DNA (174bp) protein (58aa)
membrane protein n=1 Tax=Maricaulis sp. JL2009 RepID=UPI0003A5F7F4
Membrane protein {ECO:0000313|EMBL:AHF91676.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_5490_curated_5
unknown

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comp(3629..3982)
DNA (354bp) protein (118aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_5490_curated_6
unknown

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comp(4067..4462)
DNA (396bp) protein (132aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_5490_curated_7
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4529..5332)
DNA (804bp) protein (268aa)
chemotaxis protein CheY n=1 Tax=Maricaulis sp. JL2009 RepID=UPI00039BF5BD
DNA-directed RNA polymerase specialized sigma subunit, sigma24 {ECO:0000313|EMBL:ENZ82361.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
two-component response regulator
SCNpilot_cont_1000_p_scaffold_5490_curated_8
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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5513..5740
DNA (228bp) protein (76aa)
Putative uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QW59_BREDI
Putative uncharacterized protein {ECO:0000313|EMBL:EGF96838.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
SCNpilot_cont_1000_p_scaffold_5490_curated_9
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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5740..6378
DNA (639bp) protein (213aa)
RNA polymerase sigma70 n=1 Tax=Maricaulis sp. JL2009 RepID=UPI0003A61A0A
Sigma-70 region 2 {ECO:0000313|EMBL:EKY30748.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
SCNpilot_cont_1000_p_scaffold_5490_curated_10
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6464..8062
DNA (1599bp) protein (533aa)
Signal transduction histidine kinase n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IGX4_XANP2
signal transduction histidine kinase
Signal transduction histidine kinase {ECO:0000313|EMBL:ABS67267.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
Displaying 10 items

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