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SCNpilot_cont_1000_p_scaffold_3301_curated_7

Organism: scnpilot_dereplicated_Alphaproteobacteria_2

partial RP 38 / 55 BSCG 39 / 51 MC: 1 ASCG 10 / 38
Location: comp(5554..6837)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1282362 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis sp. AC466.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.3
  • Coverage: 420.0
  • Bit_score: 710
  • Evalue 1.90e-201
Transcription termination factor Rho n=1 Tax=Asticcacaulis sp. AC466 RepID=V4PJN9_9CAUL similarity UNIREF
DB: UNIREF100
  • Identity: 84.3
  • Coverage: 420.0
  • Bit_score: 710
  • Evalue 1.40e-201
transcription termination factor rho; K03628 transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 82.6
  • Coverage: 420.0
  • Bit_score: 703
  • Evalue 4.10e-200

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Taxonomy

Asticcacaulis sp. AC466 → Asticcacaulis → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1284
ATGACTGTCCAAGATGGCCTGCAGGCGATGAAGCTGCAGGAGCTCAAGAACAAGAAACCCGCCGACCTTCTGGCCTTCGCCGAAGAACTTGAGATCGAGAACGCCTCGTCCATGCGCAAGCAGGACATGCTGTTCGCCATCCTCAAGGAGCTGGCCGAACGCAATGTCGAGATCACCGGCGGCGGCGTCGTTGAAATCCTGCAGGACGGCTTCGGCTTCCTGCGCAGCCCCGAATCCAACTATCTGCCCGGTCCCGACGACATCTATGTCGCCCCCGCCCAGATCCGCCGCTTCGGCCTTCGCACCGGCGACACGGTCGAAGGGCCGATCCGCGGCCCCAAGGAAGGCGAACGCTATTTCGCGCTGCTGAAGGTCACCACCATCAATTTCGAGGACCCCGAGCAGATCAAGCACAAGGTCCATTTCGACAACCTGACCCCGCTTTATCCCACCAAGCCGCTGCGGATGGAGCTGAACGATCCCACCATCAAGGACAAGACCGGCCGCGTCATCGACATCGTCGCGCCGCAGGGCATGGGCCAGCGTGCGCTGATCACCGCCCCGCCGCGCACCGGCAAGACGGTGATCCTGCAGAACATCGCCAAGGCGATCGCCGCCAACCATCCCGAGGCCTTCCTGATCGTGCTTCTGATCGACGAGCGCCCCGAGGAAGTCACCGACATGCAGCGCACCGTGGTGGGCGAGGTCATCTCCTCCACCTTCGACGAGCCGGCGACGCGCCATGTGCAGGTGGCCGAGATGGTGATCGAGAAGGCCAAGCGCCTGGTCGAGCACAAGCGCGATGTGATCATCCTGCTGGATTCCATCACCCGCCTGGGCCGCGCCTACAACACGGTGGTGCCGTCGTCAGGCAAGGTGCTGACCGGCGGCGTGGACGCCAACGCCCTGCAGCGGCCCAAGCGCTTCTTCGGCGCGGCGCGCAACATCGAGGAAGGCGGTTCGCTGACCATCATCGCCACCGCGCTGATCGATACCGGCAGCCGCATGGACGAAGTGATTTTCGAAGAGTTCAAGGGCACCGGCAACAGCGAAATCATCCTGGACCGCAAAGTGGCCGACAAGCGTGTGTTCCCCGCCATCGACATCATGCGTTCGGGCACCCGCAAGGACGAGCTTCTGGTCGAAAAGGGCCAGCTATCCAAGACCTATGTGCTGCGCCGCATCCTGTCGCCCATGGGCACGGTGGACGCGATCGAATTCCTGCTCGACAAGCTGCGGTCGGCCAAGAACAACGCGGACTTCTTCGAGAGCATGAATACCTGA
PROTEIN sequence
Length: 428
MTVQDGLQAMKLQELKNKKPADLLAFAEELEIENASSMRKQDMLFAILKELAERNVEITGGGVVEILQDGFGFLRSPESNYLPGPDDIYVAPAQIRRFGLRTGDTVEGPIRGPKEGERYFALLKVTTINFEDPEQIKHKVHFDNLTPLYPTKPLRMELNDPTIKDKTGRVIDIVAPQGMGQRALITAPPRTGKTVILQNIAKAIAANHPEAFLIVLLIDERPEEVTDMQRTVVGEVISSTFDEPATRHVQVAEMVIEKAKRLVEHKRDVIILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRPKRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIILDRKVADKRVFPAIDIMRSGTRKDELLVEKGQLSKTYVLRRILSPMGTVDAIEFLLDKLRSAKNNADFFESMNT*