ggKbase home page

SCNpilot_cont_1000_p_scaffold_3301_curated_13

Organism: scnpilot_dereplicated_Alphaproteobacteria_2

partial RP 38 / 55 BSCG 39 / 51 MC: 1 ASCG 10 / 38
Location: 11315..11908

Top 3 Functional Annotations

Value Algorithm Source
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=1208583 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae.;" source="Commensalibacter sp. MX01.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.0
  • Coverage: 189.0
  • Bit_score: 168
  • Evalue 9.80e-39
aroE; shikimate dehydrogenase (EC:1.1.1.25); K00014 shikimate dehydrogenase [EC:1.1.1.25] similarity KEGG
DB: KEGG
  • Identity: 48.0
  • Coverage: 173.0
  • Bit_score: 162
  • Evalue 1.60e-37
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI000368B5B7 similarity UNIREF
DB: UNIREF100
  • Identity: 47.2
  • Coverage: 193.0
  • Bit_score: 170
  • Evalue 2.40e-39

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Commensalibacter sp. MX01 → Commensalibacter → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 594
ATGACATTGACGGGAAAAGGGCGGATTGCAGGCATTATCGGCTGGCCGGTGGCGCATTCCCTGTCGCCGGCGCTGCACGGCTACTGGCTGGACGAACTCGGCGTCGACGGGGCGATGGTGCCATTGGCCGCGCGGGCGGAGGATTTTTCCCGCGTGATCGAAGGCGTCCGGCTGGCCGGTTTTCGCGGCGTCAATGTCACCGTGCCGCACAAGGAGGCGGCCTTTGCCTTGGCCCACGAAACGCGCCAAGCTGCCCGCCTCGCTGGAGCCGCCAATCTTCTGGTGTTCAAACCCGATGGGATGATCGGCGCTGACAATACCGATGCGGTTGGTTTGTTTGATAGCCTGCAGGACGCTCTGGGGGGAGTAGCTATCGCAGGTAAAAATATTGTTGTCCTGGGCGCGGGCGGTGCGGCGCGGGGCGCGGTTTATGGTCTGCAGCAATTTGGCCATGTCGCAAAGATCACTGTGTTGAACCGAAACAAGGAGCGCGCCGATCAGTTGGTTGCGCATGTGGGCAAGCTGCAGCCGGATGCAGTGCTGCAAACTGGAACATTTGACGAATGGGATCAGGCTGCTGCCGATGCTTGGCTC
PROTEIN sequence
Length: 198
MTLTGKGRIAGIIGWPVAHSLSPALHGYWLDELGVDGAMVPLAARAEDFSRVIEGVRLAGFRGVNVTVPHKEAAFALAHETRQAARLAGAANLLVFKPDGMIGADNTDAVGLFDSLQDALGGVAIAGKNIVVLGAGGAARGAVYGLQQFGHVAKITVLNRNKERADQLVAHVGKLQPDAVLQTGTFDEWDQAAADAWL