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SCNpilot_cont_300_bf_scaffold_1243_curated

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1243_curated_1
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..660
DNA (660bp) protein (220aa)
Transcriptional regulator, tetR family n=1 Tax=gamma proteobacterium HIMB55 RepID=H3NUZ9_9GAMM
TetR family transcriptional regulator
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1243_curated_2
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(611..1189)
DNA (579bp) protein (193aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002D54F43
chaC; Cation transport protein chaC
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1243_curated_3
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1186..2085)
DNA (900bp) protein (300aa)
cyclohexadienyl dehydrogenase (EC:1.3.1.12); K00220 cyclohexadieny/prephenate dehydrogenase [EC:1.3.1.43 1.3.1.12]
Cyclohexadienyl dehydrogenase n=1 Tax=Oceanibaculum indicum P24 RepID=K2J729_9PROT
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1243_curated_4
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2082..3170)
DNA (1089bp) protein (363aa)
Histidinol-phosphate aminotransferase n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F791_9PROT
hisC; histidinol-phosphate aminotransferase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1243_curated_5
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3195..4046)
DNA (852bp) protein (284aa)
Chorismate mutase n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NZU3_AZOS1
pheA; chorismate mutase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1243_curated_6
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4296..5465
DNA (1170bp) protein (390aa)
metX; homoserine O-acetyltransferase (EC:2.3.1.31); K00641 homoserine O-acetyltransferase [EC:2.3.1.31]
Homoserine O-acetyltransferase n=1 Tax=Oceanibaculum indicum P24 RepID=K2JTU2_9PROT
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1243_curated_7
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5462..6067
DNA (606bp) protein (202aa)
methionine biosynthesis MetW n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000362E038
methionine biosynthesis protein MetW
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1243_curated_8
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6076..6927)
DNA (852bp) protein (284aa)
arylamine N-acetyltransferase (EC:2.3.1.5); K00622 arylamine N-acetyltransferase [EC:2.3.1.5]
hypothetical protein n=1 Tax=Wenxinia marina RepID=UPI00037D2406
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_300_bf_scaffold_1243_curated_9
Streptomyces scabiei, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7024..7485)
DNA (462bp) protein (154aa)
Putative acetyltransferase n=1 Tax=Streptomyces scabies (strain 87.22) RepID=C9YV62_STRSW
acetyltransferase
Putative acetyltransferase {ECO:0000313|EMBL:CBG72258.1}; TaxID=680198 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces scabies (strain 87.22) (Streptomyces scabiei).;"
SCNpilot_cont_300_bf_scaffold_1243_curated_10
Streptomyces toyocaensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7478..7966)
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Erwinia toletana RepID=UPI0003456084
Prolyl-tRNA synthetase {ECO:0000313|EMBL:KES03004.1}; TaxID=55952 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces toyocaensis.;"
putative oligo-nucleotide binding protein
SCNpilot_cont_300_bf_scaffold_1243_curated_11
Cupriavidus sp. SK-3, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7956..8888)
DNA (933bp) protein (311aa)
6-phosphogluconate dehydrogenase NAD-binding protein n=1 Tax=Burkholderia sp. (strain CCGE1003) RepID=E1TK64_BURSG
6-phosphogluconate dehydrogenase {ECO:0000313|EMBL:KDP83629.1}; TaxID=1470558 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-3.;"
6-phosphogluconate dehydrogenase NAD-binding protein
SCNpilot_cont_300_bf_scaffold_1243_curated_12
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8905..9681)
DNA (777bp) protein (259aa)
Putative uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TUS3_9PROT
SAM-dependent methyltransferase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1243_curated_13
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9766..10527
DNA (762bp) protein (254aa)
metallo-beta-lactamase; K01069 hydroxyacylglutathione hydrolase [EC:3.1.2.6]
Hydroxyacylglutathione hydrolase n=1 Tax=Caenispirillum salinarum AK4 RepID=K9HFG0_9PROT
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1243_curated_14
unknown

Not on your lists

10817..11041
DNA (225bp) protein (75aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1243_curated_15
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11093..12229)
DNA (1137bp) protein (379aa)
Transporter, major facilitator family n=1 Tax=Rhodobacteraceae bacterium HTCC2083 RepID=B6AYE1_9RHOB
putative transporter, MFS-type
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1243_curated_16
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12240..13193)
DNA (954bp) protein (318aa)
Esterase/lipase id=4666489 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
alpha/beta hydrolase folD-3 domain-containing protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1243_curated_17
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13362..14327
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HZ74_PARL1
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1243_curated_18
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14349..15275
DNA (927bp) protein (309aa)
Predicted permease n=1 Tax=alpha proteobacterium BAL199 RepID=A8TRC3_9PROT
permease; K07090
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1243_curated_19
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15272..16117
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z774_AZOL4
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1243_curated_20
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16167..16649
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Novispirillum itersonii RepID=UPI000381E95E
universal stress protein UspA-like nucleotide-binding protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1243_curated_21
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16961..17506
DNA (546bp) protein (182aa)
NifU-like protein domain protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2KLQ8_9PROT
NifU-like protein domain protein {ECO:0000313|EMBL:EKE78380.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
nitrogen-fixing NifU
SCNpilot_cont_300_bf_scaffold_1243_curated_22
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17611..18720
DNA (1110bp) protein (370aa)
hypothetical protein n=1 Tax=Novispirillum itersonii RepID=UPI000361AC2D
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1243_curated_23
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18768..19325)
DNA (558bp) protein (186aa)
D-alanyl-D-alanine dipeptidase; K08641 D-alanyl-D-alanine dipeptidase [EC:3.4.13.22]
D-alanyl-D-alanine dipeptidase n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2ZPM2_9PROT
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1243_curated_24
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19387..20034
DNA (648bp) protein (216aa)
hypothetical protein; K14742 hypothetical protease [EC:3.4.-.-]
Putative Glycoprotease family protein n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FT81_PHAMO
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1243_curated_25
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20048..20545
DNA (498bp) protein (166aa)
N-acetyltransferase GCN5; K03789 ribosomal-protein-alanine N-acetyltransferase [EC:2.3.1.128]
hypothetical protein n=1 Tax=Wenxinia marina RepID=UPI00036D9EE0
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1243_curated_26
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20559..20741)
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CIY8_MYXFH
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1243_curated_27
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20848..21285
DNA (438bp) protein (146aa)
Ferric uptake regulator family protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2JSC4_9PROT
ferric uptake regulator family protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1243_curated_28
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21352..22203
DNA (852bp) protein (284aa)
Hemolysin, putative n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IUB0_RHOCS
hemolysin
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1243_curated_29
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22220..23059
DNA (840bp) protein (280aa)
Phospholipid/glycerol acyltransferase n=1 Tax=Oceanibaculum indicum P24 RepID=K2J5M3_9PROT
phospholipid/glycerol acyltransferase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1243_curated_30
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23104..24528
DNA (1425bp) protein (475aa)
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Oceanibaculum indicum P24 RepID=K2KLQ1_9PROT
miaB; isopentenyl-adenosine A37 tRNA methylthiolase; K06168 bifunctional enzyme involved in thiolation and methylation of tRNA
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Displaying items 1-30 of 37 in total

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