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SCNpilot_cont_300_bf_scaffold_4351_curated

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_4351_curated_1
unknown

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comp(2..124)
DNA (123bp) protein (41aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_4351_curated_2
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(132..923)
DNA (792bp) protein (264aa)
Amino acid ABC transporter/signal transduction system periplasmic binding protein n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7SU26_ALCXX
Amino acid ABC transporter {ECO:0000313|EMBL:KGM34388.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
extracellular solute-binding protein, family 3
SCNpilot_cont_300_bf_scaffold_4351_curated_3
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(976..1422)
DNA (447bp) protein (149aa)
ribose-5-phosphate isomerase B (EC:5.3.1.6); K01808 ribose 5-phosphate isomerase B [EC:5.3.1.6]
ribose 5-phosphate isomerase n=1 Tax=Sinorhizobium medicae RepID=UPI00036C72B2
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_4351_curated_4
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1419..2183)
DNA (765bp) protein (255aa)
GntR family transcriptional regulator n=1 Tax=Rhizobium meliloti RepID=UPI00036F5400
putative transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:CAC48761.1}; TaxID=266834 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium; meliloti).;"
SCNpilot_cont_300_bf_scaffold_4351_curated_5
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2311..3630)
DNA (1320bp) protein (440aa)
phosphoanhydride phosphorylase (EC:3.1.3.2 3.1.3.26); K01093 4-phytase / acid phosphatase [EC:3.1.3.26 3.1.3.2]
Histidine acid phosphatase n=2 Tax=Edwardsiella tarda RepID=D4F403_EDWTA
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_4351_curated_6
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3743..4123
DNA (381bp) protein (127aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_4351_curated_7
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4214..6067
DNA (1854bp) protein (618aa)
ABC transporter related protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QKC7_NITHX
ABC transporter; K06147 ATP-binding cassette, subfamily B, bacterial
ABC transporter related protein {ECO:0000313|EMBL:ABE63320.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_4351_curated_8
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6072..6497)
DNA (426bp) protein (142aa)
Peroxiredoxin, OsmC subfamily n=1 Tax=Microvirga sp. WSM3557 RepID=I4YZC8_9RHIZ
Peroxiredoxin, OsmC subfamily {ECO:0000313|EMBL:EIM29320.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
OsmC protein
SCNpilot_cont_300_bf_scaffold_4351_curated_9
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6652..7587
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8U1B7_9PROT
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_4351_curated_10
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7606..8580
DNA (975bp) protein (325aa)
protein bugT id=14627122 bin=bin7_NC10_sister species=Ramlibacter tataouinensis genus=Ramlibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
bug43; hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_4351_curated_11
unknown

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8687..8845
DNA (159bp) protein (53aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_4351_curated_12
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9007..9912)
DNA (906bp) protein (302aa)
sugar ABC transporter permease n=1 Tax=Elioraea tepidiphila RepID=UPI0003820CB0
Sugar ABC transporter permease {ECO:0000313|EMBL:KJC43643.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
ABC transporter permease; K02026 multiple sugar transport system permease protein
SCNpilot_cont_300_bf_scaffold_4351_curated_13
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9905..10861)
DNA (957bp) protein (319aa)
ABC transporter permease n=1 Tax=Elioraea tepidiphila RepID=UPI00037FE4D5
Bradyrhizobium elkanii strain UASWS1015 Contig185, whole genome shotgun sequence {ECO:0000313|EMBL:KIU44906.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein; K02025 multiple sugar transport system permease protein
SCNpilot_cont_300_bf_scaffold_4351_curated_14
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10969..12297)
DNA (1329bp) protein (443aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037110A1
ABC-type sugar transport system, periplasmic component {ECO:0000313|EMBL:EHR05454.1}; Flags: Precursor;; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM471.;"
hypothetical protein; K02027 multiple sugar transport system substrate-binding protein
SCNpilot_cont_300_bf_scaffold_4351_curated_15
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12343..13395)
DNA (1053bp) protein (351aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036959D0
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EHL95457.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
ABC transporter-like protein; K02023 multiple sugar transport system ATP-binding protein
SCNpilot_cont_300_bf_scaffold_4351_curated_16
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13614..14012
DNA (399bp) protein (133aa)
DoxX n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9DR35_9RHOB
hypothetical protein; K15977 putative oxidoreductase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_4351_curated_17
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14115..15113
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIV3_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK89143.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
extra-cytoplasmic solute receptor family protein 81
SCNpilot_cont_300_bf_scaffold_4351_curated_18
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15137..15475
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Puniceispirillum marinum (strain IMCC1322) RepID=D5BP97_PUNMI
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_4351_curated_19
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15490..15732
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V302_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EFI52332.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein
Displaying 19 items

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