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SCNpilot_cont_300_bf_scaffold_821_curated

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_821_curated_1
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..431)
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI0003638202
UspA domain-containing protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_821_curated_2
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

608..4117
DNA (3510bp) protein (1170aa)
indolepyruvate ferredoxin oxidoreductase; K04090 indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8]
Indolepyruvate ferredoxin oxidoreductase n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0GCH8_9BRAD
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_821_curated_3
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4190..5329)
DNA (1140bp) protein (380aa)
namA2; NADPH dehydrogenase NamA (EC:1.6.99.1); K00450 gentisate 1,2-dioxygenase [EC:1.13.11.4]
NADPH dehydrogenase n=1 Tax=Curvibacter lanceolatus RepID=UPI00035EFB15
NADPH dehydrogenase {ECO:0000313|EMBL:AGW89002.1}; TaxID=1366050 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii DTP0602.;"
SCNpilot_cont_300_bf_scaffold_821_curated_4
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5578..6177)
DNA (600bp) protein (200aa)
UPF0301 protein P24_16462 n=1 Tax=Oceanibaculum indicum P24 RepID=K2JVZ8_9PROT
transcriptional regulator
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_821_curated_5
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6322..6804
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TSY2_9PROT
peroxiredoxin
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_821_curated_6
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6888..7760
DNA (873bp) protein (291aa)
shikimate dehydrogenase; K00014 shikimate dehydrogenase [EC:1.1.1.25]
MycA5 n=1 Tax=Streptomyces flaveolus RepID=H9TEA6_9ACTO
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_821_curated_7
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7808..8569)
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000372B914
putative dehydrogenase/reductase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_821_curated_8
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8688..9308
DNA (621bp) protein (207aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00036BEF6B
Uncharacterized protein {ECO:0000313|EMBL:KFG68617.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
TetR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_821_curated_9
Dickeya solani, Dickeya, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9305..10444
DNA (1140bp) protein (380aa)
Uncharacterized protein n=3 Tax=Serratia plymuthica RepID=S4YS66_SERPL
Uncharacterized protein {ECO:0000313|EMBL:KHN62553.1}; TaxID=1089444 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Dickeya.;" source="Dickeya solani.;"
hypothetical protein; K02004 putative ABC transport system permease protein
SCNpilot_cont_300_bf_scaffold_821_curated_10
Burkholderiaceae bacterium 16, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10441..11121
DNA (681bp) protein (227aa)
ABC transporter, partial n=1 Tax=Dyella ginsengisoli RepID=UPI000373D3D2
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KJK23751.1}; TaxID=1619952 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae bacterium 16.;"
ABC transporter-like protein; K02003 putative ABC transport system ATP-binding protein
SCNpilot_cont_300_bf_scaffold_821_curated_11
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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11118..12035
DNA (918bp) protein (306aa)
HlyD family secretion protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RGT0_PHEZH
HlyD family secretion protein
HlyD family secretion protein {ECO:0000313|EMBL:ACG77296.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
SCNpilot_cont_300_bf_scaffold_821_curated_12
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12080..14479)
DNA (2400bp) protein (800aa)
Competence protein ComEA helix-hairpin-helix repeat region n=1 Tax=Afipia felis ATCC 53690 RepID=K8NQQ3_AFIFE
Competence protein ComEA helix-hairpin-helix repeat region {ECO:0000313|EMBL:EKS30739.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
RNA-binding S1 domain-containing protein; K06959 uncharacterized protein
SCNpilot_cont_300_bf_scaffold_821_curated_13
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14678..15271
DNA (594bp) protein (198aa)
Transcriptional regulator, TetR family n=1 Tax=Burkholderia graminis C4D1M RepID=B1G830_9BURK
TetR family transcriptional regulator
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
SCNpilot_cont_300_bf_scaffold_821_curated_14
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15364..15795
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5ELU6_BRASB
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
SCNpilot_cont_300_bf_scaffold_821_curated_15
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15835..16614)
DNA (780bp) protein (260aa)
Transcriptional regulatory protein chvI n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y4A7_9PROT
putative two-component response regulator
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_821_curated_16
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17968..18654)
DNA (687bp) protein (229aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00036C78E4
Uncharacterized protein {ECO:0000313|EMBL:KJC58450.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
TetR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_821_curated_17
Bradyrhizobium sp. ORS 375, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18823..20151
DNA (1329bp) protein (443aa)
Putative Multidrug resistance protein (HlyD family), emrA-like n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0SQS2_9BRAD
Putative Multidrug resistance protein (HlyD family), emrA-like {ECO:0000313|EMBL:CCD96549.1}; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 375.;"
HlyD family multidrug resistance protein; K03543 multidrug resistance protein A
SCNpilot_cont_300_bf_scaffold_821_curated_18
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20148..21770
DNA (1623bp) protein (541aa)
DSBA oxidoreductase n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003690551
DSBA oxidoreductase {ECO:0000313|EMBL:KJC33656.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
multidrug resistance protein EmrB-like protein; K03446 MFS transporter, DHA2 family, multidrug resistance protein B
SCNpilot_cont_300_bf_scaffold_821_curated_19
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21721..22698)
DNA (978bp) protein (326aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00035E119B
LysR family transcriptional regulator protein {ECO:0000313|EMBL:AJD46228.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;"
LysR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_821_curated_20
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22762..23643
DNA (882bp) protein (294aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI0003606079
NmrA-like family protein {ECO:0000313|EMBL:AJD46227.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;"
NmrA family protein
SCNpilot_cont_300_bf_scaffold_821_curated_21
Burkholderia phytofirmans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23774..24253
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Burkholderia phytofirmans (strain DSM 17436 / PsJN) RepID=B2T9B4_BURPP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD21016.1}; Flags: Precursor;; TaxID=398527 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia phytofirmans (strain DSM 17436 / PsJN).;"
SCNpilot_cont_300_bf_scaffold_821_curated_22
unknown

Not on your lists

24693..25727
DNA (1035bp) protein (345aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_821_curated_23
Devosia insulae, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25724..26908
DNA (1185bp) protein (395aa)
MFS transporter n=1 Tax=Hoeflea sp. 108 RepID=UPI00036B4AB7
MFS transporter {ECO:0000313|EMBL:KKB79039.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;"
major facilitator superfamily protein; K08151 MFS transporter, DHA1 family, tetracycline resistance protein
SCNpilot_cont_300_bf_scaffold_821_curated_24
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27403..27864
DNA (462bp) protein (154aa)
hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI00036430EE
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_821_curated_25
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27871..28752
DNA (882bp) protein (294aa)
Putative membrane protein n=1 Tax=Lautropia mirabilis ATCC 51599 RepID=E7RZW0_9BURK
permease
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
SCNpilot_cont_300_bf_scaffold_821_curated_26
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28829..29257
DNA (429bp) protein (143aa)
Molecular chaperone (Small heat shock protein)-like protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V5E7_SPHWW
molecular chaperone (small heat shock protein)-like protein
Molecular chaperone (Small heat shock protein)-like protein {ECO:0000313|EMBL:ABQ67513.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
SCNpilot_cont_300_bf_scaffold_821_curated_27
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29254..30729
DNA (1476bp) protein (492aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
lon; DNA-binding ATP-dependent protease La (EC:3.4.21.53); K01338 ATP-dependent Lon protease [EC:3.4.21.53]
Lon protease n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IAB0_9BRAD
Displaying 27 items

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