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SCNpilot_cont_300_bf_scaffold_3062_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_3062_curated_1
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..137
DNA (135bp) protein (45aa)
branched-chain amino acid ABC transporter substrate-binding protein n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI00034738B5
ABC transporter substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_3062_curated_2
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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369..1364
DNA (996bp) protein (332aa)
MFS transporter n=1 Tax=Advenella kashmirensis W13003 RepID=V8QVH7_9BURK
MFS transporter {ECO:0000313|EMBL:ETF02999.1}; TaxID=1424334 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella kashmirensis W13003.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3062_curated_3
Burkholderia sp. RPE67, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1398..2408)
DNA (1011bp) protein (337aa)
Transcriptional regulator LysR family n=1 Tax=Burkholderia sp. RPE64 RepID=R4X1S7_9BURK
Transcriptional regulator LysR family {ECO:0000313|EMBL:BAO89955.1}; TaxID=758796 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. RPE67.;"
transcriptional regulator LysR family
SCNpilot_cont_300_bf_scaffold_3062_curated_4
Burkholderia sp. RPE64, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2525..3880)
DNA (1356bp) protein (452aa)
Blr7582 protein n=1 Tax=Burkholderia sp. RPE64 RepID=R4X1T2_9BURK
Blr7582 protein
Blr7582 protein {ECO:0000313|EMBL:BAN26296.1}; TaxID=758793 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. RPE64.;"
SCNpilot_cont_300_bf_scaffold_3062_curated_5
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4130..5014
DNA (885bp) protein (295aa)
Citrate lyase beta subunit n=1 Tax=Variovorax sp. CF313 RepID=J2KGN9_9BURK
Citrate lyase beta subunit {ECO:0000313|EMBL:EJL72303.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
citE2; citrate lyase subunit beta; K14450 L-malyl-CoA/beta-methylmalyl-CoA lyase
SCNpilot_cont_300_bf_scaffold_3062_curated_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5016..6224
DNA (1209bp) protein (403aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00030D9BBC
L-carnitine dehydratase/bile acid-inducible protein F
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
SCNpilot_cont_300_bf_scaffold_3062_curated_7
Pseudooceanicola atlanticus, Pseudooceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6254..7759)
DNA (1506bp) protein (502aa)
putative fatty-acid--CoA ligase; K00666 fatty-acyl-CoA synthase [EC:6.2.1.-]
AMP-dependent synthetase and ligase n=1 Tax=Citreicella sp. 357 RepID=I1AX27_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KGM47251.1}; TaxID=1461694 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola sp. 22II-S11g.;"
SCNpilot_cont_300_bf_scaffold_3062_curated_8
Cupriavidus pinatubonensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7807..8805)
DNA (999bp) protein (333aa)
Uncharacterized protein UPF0065 n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46UG4_CUPPJ
hypothetical protein
Uncharacterized protein UPF0065 {ECO:0000313|EMBL:AAZ63220.1}; TaxID=264198 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) (Ralstonia; eutropha (strain JMP 134)).;"
SCNpilot_cont_300_bf_scaffold_3062_curated_9
Burkholderiaceae bacterium 16, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8946..9686
DNA (741bp) protein (247aa)
Regulatory protein, IclR n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46UF4_CUPPJ
IclR family transcriptional regulator {ECO:0000313|EMBL:KJK21361.1}; TaxID=1619952 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae bacterium 16.;"
regulatory protein IclR
SCNpilot_cont_300_bf_scaffold_3062_curated_10
Burkholderia sp. MR1, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9711..10463
DNA (753bp) protein (251aa)
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:KIG11109.1}; EC=1.1.1.100 {ECO:0000313|EMBL:KIG11109.1};; TaxID=870478 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. MR1.;"
fabG3; 3-oxoacyl-ACP reductase (EC:1.1.1.100); K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
3-oxoacyl-[acyl-carrier-protein] reductase FabG n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=F8GV30_CUPNN
SCNpilot_cont_300_bf_scaffold_3062_curated_11
Burkholderia sp. MR1, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10453..11208
DNA (756bp) protein (252aa)
Isovaleryl-CoA dehydrogenase {ECO:0000313|EMBL:KIG11110.1}; EC=1.3.8.4 {ECO:0000313|EMBL:KIG11110.1};; TaxID=870478 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. MR1.;"
acyl-CoA dehydrogenase (EC:1.3.-.-)
Acyl-CoA dehydrogenase, N-terminal domain protein 17 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HMM3_ACHXA
Displaying 11 items

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