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SCNpilot_cont_300_bf_scaffold_1316_curated

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1316_curated_1
Acinetobacter baumannii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

158..946
DNA (789bp) protein (263aa)
aphE; streptomycin 3''-kinase (EC:2.7.1.87); K10673 streptomycin 3"-kinase [EC:2.7.1.87]
Streptomycin 3''-kinase (Streptomycin 3''-phosphotransferase) (Streptomycin 6-phosphotransferase) (Streptomycin 6-kinase) {ECO:0000313|EMBL:CAM88416.1}; EC=2.7.1.87 {ECO:0000313|EMBL:CAM88416.1};; TaxID=509173 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; Acinetobacter calcoaceticus/baumannii complex.;" source="Acinetobacter baumannii (strain AYE).;"
StrA n=6 Tax=Acinetobacter baumannii RepID=Q2FD35_ACIBA
SCNpilot_cont_300_bf_scaffold_1316_curated_2
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1086..1838
DNA (753bp) protein (251aa)
Glutamine amidotransferase class-I n=1 Tax=Rhizobium leguminosarum bv. trifolii (strain WSM1325) RepID=C6B351_RHILS
Glutamine amidotransferase protein {ECO:0000313|EMBL:AJC77525.1}; TaxID=1432049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. phaseoli str. IE4803.;"
glutamine amidotransferase
SCNpilot_cont_300_bf_scaffold_1316_curated_3
bacterium YEK0313, Bacteria

Not on your lists

2017..3030
DNA (1014bp) protein (338aa)
Tripartite ATP-independent periplasmic transporter solute receptor, DctP family n=1 Tax=Phyllobacterium sp. YR531 RepID=J3HRH7_9RHIZ
Sialic acid-binding periplasmic protein SiaP {ECO:0000313|EMBL:CEJ11605.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
TRAP dicarboxylate transporter subunit DctP
SCNpilot_cont_300_bf_scaffold_1316_curated_4
bacterium YEK0313, Bacteria

Not on your lists

3036..4913
DNA (1878bp) protein (626aa)
TRAP transporter, DctM subunit n=1 Tax=Phyllobacterium sp. YR531 RepID=J2VCG0_9RHIZ
Sialic acid TRAP transporter permease protein SiaT {ECO:0000313|EMBL:CEJ11604.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
putative TRAP-type C4-dicarboxylate transport system, fusion of small and large permease proteins DctQ/DctM domains
SCNpilot_cont_300_bf_scaffold_1316_curated_5
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4910..5422)
DNA (513bp) protein (171aa)
Shikimate kinase n=1 Tax=Phyllobacterium sp. YR531 RepID=J2VKJ2_9RHIZ
Shikimate kinase {ECO:0000313|EMBL:EJN06567.1}; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;"
shikimate kinase
SCNpilot_cont_300_bf_scaffold_1316_curated_6
Rhodospirillum rubrum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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5504..5794
DNA (291bp) protein (97aa)
Antibiotic biosynthesis monooxygenase n=2 Tax=Rhodospirillum rubrum RepID=G2T878_RHORU
antibiotic biosynthesis monooxygenase
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:ABC21194.1}; TaxID=269796 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG; 4362 / NCIB 8255 / S1).;"
SCNpilot_cont_300_bf_scaffold_1316_curated_7
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5805..6275)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A0D2_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EHM01066.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1316_curated_8
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6290..6700)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A486_STAND
Uncharacterized protein {ECO:0000313|EMBL:KFC75960.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1316_curated_9
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6790..7203)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J3CKH2_9BURK
Variovorax paradoxus strain MEDvA23 contig_49, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ28206.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
glutathione-dependent formaldehyde-activating protein
SCNpilot_cont_300_bf_scaffold_1316_curated_10
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7244..8056)
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Cupriavidus basilensis OR16 RepID=H1S465_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EHP42704.1}; TaxID=1127483 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis OR16.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1316_curated_11
Burkholderia sp. CCGE1001, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8070..8855)
DNA (786bp) protein (262aa)
Uncharacterized protein n=2 Tax=Burkholderia RepID=K0DVC7_9BURK
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:ADX58025.1}; TaxID=640510 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. CCGE1001.;"
SCNpilot_cont_300_bf_scaffold_1316_curated_12
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8944..10164
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y5X7_SORCE
Cupriavidus basilensis strain 4G11 chromosome main, complete sequence {ECO:0000313|EMBL:AJG20758.1}; TaxID=68895 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1316_curated_13
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

10240..10893
DNA (654bp) protein (218aa)
UPI0003CE1A44 related cluster n=1 Tax=unknown RepID=UPI0003CE1A44
hypothetical protein rbh
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
SCNpilot_cont_300_bf_scaffold_1316_curated_14
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11000..11644
DNA (645bp) protein (215aa)
UPI0003CE1A44 related cluster n=1 Tax=unknown RepID=UPI0003CE1A44
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESW89776.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
SCNpilot_cont_300_bf_scaffold_1316_curated_15
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11694..12995)
DNA (1302bp) protein (434aa)
Acyl-CoA dehydrogenase n=1 Tax=Alcanivorax sp. PN-3 RepID=U7I288_9GAMM
acyl-CoA dehydrogenase family protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_1316_curated_16
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13139..14356
DNA (1218bp) protein (406aa)
LuxA-like protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89EN9_BRADU
Luciferase {ECO:0000313|EMBL:ETR78680.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
LuxA-like protein rbh
SCNpilot_cont_300_bf_scaffold_1316_curated_17
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14399..15547
DNA (1149bp) protein (383aa)
L-aminopeptidase/D-esterase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D4W3_9RHIZ
L-aminopeptidase/D-esterase {ECO:0000313|EMBL:EYR78373.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
aminopeptidase DmpA
SCNpilot_cont_300_bf_scaffold_1316_curated_18
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15676..16143
DNA (468bp) protein (156aa)
transcriptional regulator n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI00037806CE
hypothetical protein
Hypothetical conserved protein {ECO:0000313|EMBL:ABC91458.1}; TaxID=347834 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli (strain CFN 42 / ATCC 51251).;"
SCNpilot_cont_300_bf_scaffold_1316_curated_19
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16202..17287
DNA (1086bp) protein (362aa)
Adenylate/guanylate cyclase domain {ECO:0000313|EMBL:CCF00870.1}; EC=4.6.1.1 {ECO:0000313|EMBL:CCF00870.1};; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium fredii (strain HH103) (Sinorhizobium fredii).;"
Adenylate/guanylate cyclase n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9AII8_RHIFH
adenylate/guanylate cyclase
SCNpilot_cont_300_bf_scaffold_1316_curated_20
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17268..17834)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NCG6_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS28247.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1316_curated_21
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17887..18267)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JAW2_AGRRK
hypothetical protein
Ubiquinone biosynthesis protein {ECO:0000313|EMBL:KEA07701.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;"
Displaying 21 items

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