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SCNpilot_cont_300_bf_scaffold_2892_curated

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2892_curated_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

66..3077
DNA (3012bp) protein (1004aa)
hypothetical protein, partial n=1 Tax=gamma proteobacterium SCGC AB-629-K02 RepID=UPI00037FE0DB
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
SCNpilot_cont_300_bf_scaffold_2892_curated_2
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3323..4240)
DNA (918bp) protein (306aa)
Putative transcriptional regulator, LysR family protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9URQ9_9SPHN
Putative transcriptional regulator, LysR family protein {ECO:0000313|EMBL:ENY81024.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
LysR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_2892_curated_3
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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4375..5958
DNA (1584bp) protein (528aa)
Bacterial extracellular solute-binding protein, family 5 middle family protein 20 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HNN9_ACHXA
Uncharacterized protein {ECO:0000313|EMBL:ETW95212.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
family 5 extracellular solute-binding protein
SCNpilot_cont_300_bf_scaffold_2892_curated_4
Sodalis praecaptivus, Sodalis, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6028..7569
DNA (1542bp) protein (514aa)
amidohydrolase n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI00034AC28C
Amidohydrolase {ECO:0000313|EMBL:AHF79300.1}; TaxID=1239307 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Sodalis.;" source="Sodalis praecaptivus.;"
amidohydrolase
SCNpilot_cont_300_bf_scaffold_2892_curated_5
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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7572..8486
DNA (915bp) protein (305aa)
ABC transporter permease n=1 Tax=Ralstonia sp. PBA RepID=I9KV08_9RALS
Uncharacterized protein {ECO:0000313|EMBL:ETW95213.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
appB; ABC-type transporter, permease component: PepT family protein
SCNpilot_cont_300_bf_scaffold_2892_curated_6
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8483..9343
DNA (861bp) protein (287aa)
Uncharacterized protein {ECO:0000313|EMBL:ETW95214.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
ABC transporter permease; K02034 peptide/nickel transport system permease protein id=1242175 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
appC; oligopeptide ABC transporter permease; K02034 peptide/nickel transport system permease protein
SCNpilot_cont_300_bf_scaffold_2892_curated_7
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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9349..10326
DNA (978bp) protein (326aa)
Peptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:ETW95211.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
sta:STHERM_c02790 oligopeptide/dipeptide ABC transporter ATP-binding protein-like protein id=1242174 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
peptide ABC transporter ATPase; K02031 peptide/nickel transport system ATP-binding protein
SCNpilot_cont_300_bf_scaffold_2892_curated_8
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10323..11333
DNA (1011bp) protein (337aa)
ABC transporter ATP-binding protein n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0GC53_9BRAD
Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:ETW95210.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
ABC transporter ATP-binding protein; K02032 peptide/nickel transport system ATP-binding protein
SCNpilot_cont_300_bf_scaffold_2892_curated_9
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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11401..12312
DNA (912bp) protein (304aa)
Polysaccharide deacetylase n=1 Tax=Achromobacter piechaudii HLE RepID=J4J880_9BURK
Chitin deacetylase {ECO:0000313|EMBL:ETX01383.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
polysaccharide deacetylase
SCNpilot_cont_300_bf_scaffold_2892_curated_10
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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12321..13235
DNA (915bp) protein (305aa)
Putative xylanase/chitin deacetylase n=1 Tax=Pseudomonas sp. G5(2012) RepID=S2ETY1_9PSED
Allantoinase {ECO:0000313|EMBL:KJZ35681.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;"
chitin deacetylase
SCNpilot_cont_300_bf_scaffold_2892_curated_11
RBG_19FT_COMBO_Chloroflexi_48_23_curated, Chloroflexi, Bacteria

Not on your lists

13232..14446
DNA (1215bp) protein (405aa)
dly:Dehly_0640 amidohydrolase id=1241628 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
metal-dependent amidase/aminoacylase/carboxypeptidase
Tax=RBG_19FT_COMBO_Chloroflexi_48_23_curated
SCNpilot_cont_300_bf_scaffold_2892_curated_12
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14387..15682)
DNA (1296bp) protein (432aa)
Transcriptional regulator, LysR family n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F9V7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KGE00965.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
transcriptional regulator, LysR family
SCNpilot_cont_300_bf_scaffold_2892_curated_13
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15859..16863
DNA (1005bp) protein (335aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003668EEA
NMT1/THI5-like domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
SCNpilot_cont_300_bf_scaffold_2892_curated_14
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16896..17678
DNA (783bp) protein (261aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003663F19
nitrate/sulfonate/bicarbonate ABC transporter ATPase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
SCNpilot_cont_300_bf_scaffold_2892_curated_15
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17650..18465
DNA (816bp) protein (272aa)
ABC transporter permease n=2 Tax=Alcaligenes RepID=U1YE50_9BURK
ABC transporter permease
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
SCNpilot_cont_300_bf_scaffold_2892_curated_16
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18488..20005
DNA (1518bp) protein (506aa)
amidohydrolase; K12960 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003796F91
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_2892_curated_17
unknown

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20096..20224
DNA (129bp) protein (43aa)

This feature has no annotations

Displaying 17 items

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