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SCNpilot_cont_300_bf_scaffold_6791_curated

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_6791_curated_1
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..264
DNA (264bp) protein (88aa)
Acyl-CoA dehydrogenase n=1 Tax=Alcanivorax sp. PN-3 RepID=U7HTW3_9GAMM
acyl-CoA dehydrogenase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_6791_curated_2
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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470..1315
DNA (846bp) protein (282aa)
Tryptophan 2,3-dioxygenase {ECO:0000256|HAMAP-Rule:MF_01972}; Short=TDO {ECO:0000256|HAMAP-Rule:MF_01972};; EC=1.13.11.11 {ECO:0000256|HAMAP-Rule:MF_01972};; Tryptamin 2,3-dioxygenase {ECO:0000256|HAMAP-Rule:MF_01972}; Tryptophan oxygenase {ECO:0000256|HAMAP-Rule:MF_01972}; Tryptophan pyrrolase {ECO:0000256|HAMAP-Rule:MF_01972}; Tryptophanase {ECO:0000256|HAMAP-Rule:MF_01972}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvi
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002F33F75
tryptophan 2,3-dioxygenase
SCNpilot_cont_300_bf_scaffold_6791_curated_3
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1593..2693)
DNA (1101bp) protein (367aa)
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IDE7_XANP2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS66040.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCNpilot_cont_300_bf_scaffold_6791_curated_4
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2976..3554)
DNA (579bp) protein (193aa)
Transcriptional regulator, TetR family n=1 Tax=Caulobacter sp. (strain K31) RepID=B0SXE0_CAUSK
TetR family transcriptional regulator
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_6791_curated_5
unknown

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comp(3521..3718)
DNA (198bp) protein (66aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_6791_curated_6
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

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4100..5233
DNA (1134bp) protein (378aa)
Aminomethyltransferase {ECO:0000256|RuleBase:RU003981}; EC=2.1.2.10 {ECO:0000256|RuleBase:RU003981};; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competibacter denitrificans Run_A_D11.;"
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI000364CEF9
gcvT; glycine cleavage T-protein
SCNpilot_cont_300_bf_scaffold_6791_curated_7
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5243..5620
DNA (378bp) protein (126aa)
Glycine cleavage system H protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TSZ2_9PROT
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
glycine cleavage system protein H; K02437 glycine cleavage system H protein
SCNpilot_cont_300_bf_scaffold_6791_curated_8
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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5633..6979
DNA (1347bp) protein (449aa)
Probable glycine dehydrogenase (decarboxylating) subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712, ECO:0000256|SAAS:SAAS00015358}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00712, ECO:0000256|SAAS:SAAS00022796};; Glycine cleavage system P-protein subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712}; Glycine decarboxylase subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712}; Glycine dehydrogenase (aminomethyl-transferring) subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria;
gcvPA; glycine cleavage system P-protein, subunit 1; K00282 glycine dehydrogenase subunit 1 [EC:1.4.4.2]
Probable glycine dehydrogenase [decarboxylating] subunit 1 n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z4V3_AZOL4
SCNpilot_cont_300_bf_scaffold_6791_curated_9
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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7174..8547
DNA (1374bp) protein (458aa)
Glycine dehydrogenase (aminomethyl-transferring) {ECO:0000256|SAAS:SAAS00022796}; EC=1.4.4.2 {ECO:0000256|SAAS:SAAS00022796};; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
gcvPB; glycine dehydrogenase subunit 2 (EC:1.4.4.2); K00283 glycine dehydrogenase subunit 2 [EC:1.4.4.2]
Glycine dehydrogenase subunit 2 n=1 Tax=Oceanibaculum indicum P24 RepID=K2JNR4_9PROT
Displaying 9 items

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