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SCNpilot_cont_300_bf_scaffold_2259_curated

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2259_curated_1
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..3838)
DNA (3837bp) protein (1279aa)
Putative protease n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I456_AZOC5
protease
Putative protease {ECO:0000313|EMBL:BAF87690.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCNpilot_cont_300_bf_scaffold_2259_curated_2
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4011..8453)
DNA (4443bp) protein (1481aa)
Putative protease n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I456_AZOC5
protease
Putative protease {ECO:0000313|EMBL:BAF87690.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCNpilot_cont_300_bf_scaffold_2259_curated_3
Burkholderia sp. YI23, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8651..10234
DNA (1584bp) protein (528aa)
Monooxygenase FAD-binding protein n=1 Tax=Burkholderia sp. YI23 RepID=G8MHU2_9BURK
monooxygenase FAD-binding protein
Monooxygenase FAD-binding protein {ECO:0000313|EMBL:AET93159.1}; TaxID=1097668 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. YI23.;"
SCNpilot_cont_300_bf_scaffold_2259_curated_4
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10255..11124)
DNA (870bp) protein (290aa)
enoyl-CoA hydratase/isomerase; K13779 isohexenylglutaconyl-CoA hydratase [EC:4.2.1.57]
Enoyl-CoA hydratase/isomerase n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WQJ0_VEREI
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:ABM59897.1}; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="Verminephrobacter eiseniae (strain EF01-2).;"
SCNpilot_cont_300_bf_scaffold_2259_curated_5
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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11208..12059
DNA (852bp) protein (284aa)
Transcriptional regulator, LysR family n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WQI8_VEREI
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABM59895.1}; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="Verminephrobacter eiseniae (strain EF01-2).;"
SCNpilot_cont_300_bf_scaffold_2259_curated_6
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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12179..13795
DNA (1617bp) protein (539aa)
carboxyl transferase domain-containing protein 2 (EC:6.4.1.-); K13778 geranyl-CoA carboxylase beta subunit [EC:6.4.1.5]
Carboxyl transferase domain protein 2 {ECO:0000313|EMBL:ADP19208.1}; EC=6.4.1.- {ECO:0000313|EMBL:ADP19208.1};; TaxID=762376 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans (strain A8).;"
Carboxyl transferase domain protein 2 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HJH6_ACHXA
SCNpilot_cont_300_bf_scaffold_2259_curated_7
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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13819..14982
DNA (1164bp) protein (388aa)
Isovaleryl-CoA dehydrogenase (EC:1.3.99.10); K11731 citronellyl-CoA dehydrogenase [EC:1.3.99.-]
Isovaleryl-CoA dehydrogenase {ECO:0000313|EMBL:AEB82456.1}; EC=1.3.99.10 {ECO:0000313|EMBL:AEB82456.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Acyl-CoA dehydrogenase domain-containing protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TR87_ALIDB
SCNpilot_cont_300_bf_scaffold_2259_curated_8
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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14999..16948
DNA (1950bp) protein (650aa)
Carbamoyl-phosphate synthase L chain ATP-binding protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TR86_ALIDB
carbamoyl-phosphate synthase l chain ATP-binding protein
Carbamoyl-phosphate synthase L chain ATP-binding protein {ECO:0000313|EMBL:GAO25730.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_cont_300_bf_scaffold_2259_curated_9
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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16945..18777
DNA (1833bp) protein (611aa)
Uncharacterized protein n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WQI6_VEREI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM59893.1}; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="Verminephrobacter eiseniae (strain EF01-2).;"
SCNpilot_cont_300_bf_scaffold_2259_curated_10
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18843..19820
DNA (978bp) protein (326aa)
Extra-cytoplasmic solute receptor n=2 Tax=Alicycliphilus denitrificans RepID=E8TR84_ALIDB
ABC transporter substrate-binding protein
Extra-cytoplasmic solute receptor {ECO:0000313|EMBL:AEB82453.1}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_cont_300_bf_scaffold_2259_curated_11
unknown

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comp(19930..20109)
DNA (180bp) protein (60aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2259_curated_12
Thalassospira permensis, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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20172..22619
DNA (2448bp) protein (816aa)
hypothetical protein n=1 Tax=Ancylobacter sp. FA202 RepID=UPI000374333E
Uncharacterized protein {ECO:0000313|EMBL:KEO52528.1}; TaxID=1353532 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira permensis NBRC 106175.;"
hypothetical protein
Displaying 12 items

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